Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	3579931	3580051	121	13 [12]	[11] 19	benR	BenABC operon transcriptional activator

CCAACCCCCGCCTTTTTGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCCGCACCA  >  AE015451/3579704‑3579983                                                                                                                                                                                                                                   |                                                      ccAACCCCCGCCTTTTTGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTAtgt                                              <  1:503746/236‑1 (MQ=255)                           tCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTc                                                       <  2:438599/201‑1 (MQ=255)                           tCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCAtt                       <  2:478766/233‑1 (MQ=255)                               cTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATc                  <  2:729192/234‑1 (MQ=255)                                               cccTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCCGcacca  <  2:439433/233‑1 (MQ=255)                                                                 cTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTa                                 >  1:794625/1‑185 (MQ=255)                                                                 cTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTa                                 <  2:794622/185‑1 (MQ=255)                                                                                         gatgaCCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCt             <  2:503820/181‑1 (MQ=255)                                                                                            gaCCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGc                              <  1:393654/161‑1 (MQ=255)                                                                                             aCCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGc                                      <  2:311673/152‑1 (MQ=255)                                                                                                      acaGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATc                  <  2:417590/163‑1 (MQ=255)                                                                                                                                                          gccttgcctATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTAt                                                >  1:865405/1‑81 (MQ=255)                                                                                                                                                          gccttgcctATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTAt                                                <  2:865402/81‑1 (MQ=255)                                                                                                                                                                                                                                   |                                                      CCAACCCCCGCCTTTTTGCTGTAGTGTCCCCTATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCCGCACCA  >  AE015451/3579704‑3579983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑