Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	2478338	2478558	221	13 [9]	[12] 13	PP_2172	conserved exported protein of unknown function

CGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGATTTGACCGCATCCATGCAGTACCGGCTGTAGCGTGCACGAGAGCTCC  >  AE015451/2478441‑2478794                                                                                                                       |                                                                                                                                                                                                                                            cggtggTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGAGCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCCAGCGCAACAGCGACAACGGt                                                                                                                                                                                                    >  2:468777/1‑160 (MQ=255)                tGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCg                                                                                                                                                                                                                                          <  1:301688/107‑1 (MQ=255)                    aaCGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATaa                                                                                                     >  1:554508/1‑236 (MQ=255)                                      ggTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCaa                                                                                   >  1:640056/1‑236 (MQ=255)                                      ggTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCa                                                                                    >  1:360848/1‑235 (MQ=255)                                                       tAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGtcttc                                                                    >  2:893647/1‑234 (MQ=255)                                                            gAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAacga                                                                                                                     >  2:19752/1‑180 (MQ=255)                                                                  ggAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGAt                                                       >  1:593755/1‑236 (MQ=255)                                                                       ggCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCga                                                    >  2:680170/1‑234 (MQ=255)                                                                                            ggAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGATTTGACCGCATCCATGCAg                              >  1:409459/1‑235 (MQ=255)                                                                                                aGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGATTTGACCGCATCCATGCAGTACCg                         >  1:610099/1‑236 (MQ=255)                                                                                                             tCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGCCACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCa                                                                                    <  1:400805/164‑1 (MQ=255)                                                                                                                       aGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGATTTGACCGCATCCATGCAGTACCGGCTGTAGCGTGCACGAGAGCTcc  <  1:19752/236‑1 (MQ=255)                                                                                                                       |                                                                                                                                                                                                                                            CGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGATTTGACCGCATCCATGCAGTACCGGCTGTAGCGTGCACGAGAGCTCC  >  AE015451/2478441‑2478794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑