Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	4150091–4150096	4150229	134–139	13 [12]	[12] 13	PP_3654/PP_3655	leucine‑responsive regulatory protein/Cytosine/purine/uracil/thiamine/allantoin permease family protein

GCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGTCAGTCATGACCAGTGCAGCCAATTCGGCACCCCTGATAGAAAAACACACGATCGGCTACGTGCCCCCGCA  >  AE015451/4150166‑4150462                                                                 |                                                                                                                                                                                                                                         gCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTAAGCttt                                                                                                                                                                                                                             >  1:695296/1‑78 (MQ=255) gCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTAAGCttt                                                                                                                                                                                                                             <  2:695293/78‑1 (MQ=255)            cgccCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTAAGCTTTTGTCAGCCtt                                                                                                                                                                                                                   <  1:875178/77‑1 (MQ=255)            cgccCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTAAGCTTTTGTCAGCCtt                                                                                                                                                                                                                   >  2:875175/1‑77 (MQ=255)                   ctACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGTCAGTCATGACCAGTGCAg                                                      >  2:823056/1‑227 (MQ=255)                       cccAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGTCAGTCATGACCAGTGCAGCCAATTCg                                              >  2:514231/1‑231 (MQ=255)                                 tCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTAGGCTTTTGCCTGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGTCAGTCATGACCAGTGCAGCCAATTCGGCACCCCt                                      >  2:359916/1‑229 (MQ=255)                                                     ttGCTACCGTCACCCGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGCCAGTCATGACCAGTGCAGCCAATTCGGCACCCCTGATAGAAAACCACACGATCGGCTAc             >  1:163864/1‑234 (MQ=255)                                                               cACCCGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGTCAGTCATGACCAGTGCAGCCAATTCGGCAc                                          <  1:783482/195‑1 (MQ=255)                                                               cACCCGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGTCAGTCATGACCAGTGCAGCCAATTCGGCAc                                          >  2:783479/1‑195 (MQ=255)                                                               cACCCGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGTCAGTCATGACCAGTGCAGCCAATTCGGCACCCCTGATa                                  >  2:21333/1‑203 (MQ=255)                                                               cACCCGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGTCAGTCATGACCAGTGCAGCCAATTCGGCACCCCTGATAGAAAAACACACGATCGGCTACGTGCCCCCGCa  >  2:381365/1‑235 (MQ=255)                                                                 cccGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGagt                                                                        >  2:751941/1‑163 (MQ=255)                                                                 |                                                                                                                                                                                                                                         GCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTAAGCTTTTGTCAGCCTTAGTTTTTTTAACGCTTATGGGTACATATTTACTAATTTCTCGTTATCCCCGCGCCCCTCATCATCGCTCCAACAAGAACGCGTCGCCCACCGCCGGCACGCCCCCGGGCAGTTCCCAATGCCCTACCTTGCCTTGGAGTCAGTCATGACCAGTGCAGCCAATTCGGCACCCCTGATAGAAAAACACACGATCGGCTACGTGCCCCCGCA  >  AE015451/4150166‑4150462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑