| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 3,029,299 | A→G | 6.9% | T318A (ACC→GCC) ‡ | pcaY → | aromatic acid chemoreceptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 3,029,299 | 0 | A | G | 6.9% | 187.3 / 3.8 | 58 | T318A (ACC→GCC) ‡ | pcaY | aromatic acid chemoreceptor |
| Reads supporting (aligned to +/- strand): ref base A (24/30); new base G (2/2); total (26/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.28e-01 | |||||||||||
GCGACCTGAGTGTGCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGCAAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGC > AE015451/3029066‑3029524 | gCGACCGGAGTGTGCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GAc < 1:932009/235‑1 (MQ=255) cTGAGTGTGCCGTTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GAcc < 1:200866/231‑1 (MQ=255) tgtgCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTgg < 1:781479/236‑1 (MQ=255) gggCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGGGGAGGAAGTTgcgcg > 1:173084/1‑236 (MQ=255) ggCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTgcgcgc < 1:415112/236‑1 (MQ=255) gTAACAACGGAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAAcgc < 1:846333/235‑1 (MQ=255) tAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAg > 2:630566/1‑221 (MQ=255) tAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCa > 1:610079/1‑230 (MQ=255) gAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATcaccac > 1:309325/1‑236 (MQ=255) tCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCa > 2:916376/1‑234 (MQ=255) aGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGGTCATTTC‑GGTCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGGGAATCCAAcc > 2:499308/1‑234 (MQ=255) aGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAAc > 2:595894/1‑233 (MQ=255) cgcATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCt > 2:366382/1‑208 (MQ=255) agcagAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAaccac > 1:367386/1‑211 (MQ=255) agcagAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAaccac < 2:367383/211‑1 (MQ=255) cgACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAgccgcc < 2:543407/233‑1 (MQ=255) acacTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCa > 1:476860/1‑235 (MQ=255) ggCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGa > 1:362997/1‑235 (MQ=255) aacaacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTgcgc > 2:547843/1‑151 (MQ=255) aacaacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCACGTCAGCGAAAACATCGa > 1:54102/1‑236 (MQ=255) aacaacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGa > 1:287632/1‑236 (MQ=255) caacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGa < 2:389415/234‑1 (MQ=255) cTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGcc > 1:539865/1‑235 (MQ=255) cccGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCAcc > 2:494366/1‑233 (MQ=255) ccGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAg > 1:264743/1‑236 (MQ=255) ggCTGGGCGCCGCCGCCACGGCGTTGGACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATca < 2:174238/146‑1 (MQ=255) ccgccgccACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTc < 2:277830/145‑1 (MQ=255) ccgccACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGGTC‑ATTTCGGTCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAacctcacc < 2:431358/154‑6 (MQ=255) ccgccACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGGTC‑ATTTCGGTCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAacctcacc > 1:431361/1‑149 (MQ=255) ggCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGAcc < 1:630569/235‑1 (MQ=255) gAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTg < 1:502841/236‑1 (MQ=255) aaCGCCGTCACCGAGGAAAGCGCCAACAACCTGCGGCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCaccacc < 2:161675/126‑1 (MQ=255) aCGCCGTCCCCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGCGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGaa < 1:171906/218‑1 (MQ=255) aCGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTgcg < 1:839383/236‑1 (MQ=255) cACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCAcc < 2:362994/233‑1 (MQ=255) ccGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTgcag > 1:322015/1‑236 (MQ=255) aaaGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGt < 2:476857/234‑1 (MQ=255) acCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGGTCATTTC‑GGTCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAATATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGt < 1:499311/235‑1 (MQ=255) ccgcagGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTg < 2:399695/197‑1 (MQ=255) cagGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCgg < 1:628789/236‑1 (MQ=255) cagGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCgg < 1:595897/236‑1 (MQ=255) cagGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCg < 1:75992/235‑1 (MQ=255) gggCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGCaa > 1:496442/1‑236 (MQ=255) cAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAgg > 2:397155/1‑217 (MQ=255) tGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTtggtgg > 2:417151/1‑204 (MQ=255) tGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTtggtgg < 1:417154/204‑1 (MQ=255) gCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGCAAGGTGCTGGAAGTg < 1:481450/235‑1 (MQ=255) cAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAg > 2:897871/1‑125 (MQ=255) ggCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGCAAGGTGCTGGAAGTGATcc < 1:497943/236‑1 (MQ=255) gccgccACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGCAAGGTGCTGGAAGTGATCCg < 1:293004/236‑1 (MQ=255) cgccACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGGGGGGCAGGTGCGGGACATCGGCAAGGTGCTGGAAGTGATCCGCt > 1:35536/1‑236 (MQ=255) cACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGAc < 2:221124/162‑1 (MQ=255) aCTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACAAGTGAATCAAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATg > 2:811846/1‑144 (MQ=255) aCTGCCGTGACCGAAAT‑GACCACGGCAGAGGAGGAAGTTGCGCGCAACGCGAGCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCgg < 2:38422/209‑1 (MQ=255) ccGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGCAAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGc < 2:496439/234‑1 (MQ=255) gAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGAc < 2:528679/149‑1 (MQ=255) gAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGAc > 1:528682/1‑149 (MQ=255) ggACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCgg < 2:173082/192‑1 (MQ=255) aCCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCGGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCg < 2:127425/190‑1 (MQ=255) | GCGACCTGAGTGTGCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAT‑GACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGCAAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGC > AE015451/3029066‑3029524 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |