| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 4,475,554 | G→C | 6.1% | intergenic (‑19/+45) | PP_3964 ← / ← PP_3965 | transposase/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 4,475,554 | 0 | G | C | 6.1% | 225.6 / 6.4 | 66 | intergenic (‑19/+45) | PP_3964/PP_3965 | transposase/transposase |
| Reads supporting (aligned to +/- strand): ref base G (18/44); new base C (2/2); total (20/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.37e-01 | |||||||||||
CAAGTTGCTTTGCGCCGGGCTGATTTGCTCGCTGCGCTTGGCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGC > AE015451/4475320‑4475779 | cAAGTTGCTTTGCGCCGGGCTGATTTGCTCGCTGCGCTTGGCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCagag < 1:880971/235‑1 (MQ=255) aGTTGCTTTGCGCCGGGCTGATTTGCTCGCTGCGCTTGGCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAg < 1:800689/236‑1 (MQ=255) gcgcCGGGCTGATTTGCTCGCTGCGCTTGGCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGc < 1:914093/236‑1 (MQ=255) cGGGCTGATTTGCTCGCTGCGCTTGGCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGcgacg < 1:887985/236‑1 (MQ=255) gCTGCGCTTGGCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGc < 1:916951/235‑1 (MQ=255) cTGCGCTTGGCAAACTTGTGCCGTTTGGGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGc < 2:797416/216‑1 (MQ=255) cgcTTGGCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGGATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCaaa < 1:773704/235‑1 (MQ=255) cTTGGCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTAGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATg < 1:739432/235‑1 (MQ=255) tagCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGCCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCaaa < 1:912137/229‑1 (MQ=255) cGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGtt > 1:262825/1‑228 (MQ=255) cGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCAt > 1:21414/1‑236 (MQ=255) ttGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAAt < 2:731512/215‑1 (MQ=255) tGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCGCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGc < 2:215692/191‑1 (MQ=255) gAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGCGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACacg > 2:206888/1‑197 (MQ=255) gCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATg < 1:307783/207‑1 (MQ=255) cTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGa < 2:587541/230‑1 (MQ=255) tGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCt < 1:925664/235‑1 (MQ=255) gATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGcc > 1:14985/1‑187 (MQ=255) aGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAg < 1:45216/236‑1 (MQ=255) cATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGc < 1:904666/236‑1 (MQ=255) gAATCGTCCTGCTCATCGCCTCGACCTGGGATGGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCCAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGCCCGGCCAAATGGCCGGCGTTTACAg < 2:580586/178‑1 (MQ=255) aTCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACgcgc < 1:46471/207‑1 (MQ=255) cTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCAc < 2:21414/193‑1 (MQ=255) tGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGcgacg > 2:501660/1‑135 (MQ=255) tGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAgttgt < 1:504678/236‑1 (MQ=255) tCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGc < 1:758970/234‑1 (MQ=255) tCGCCTCGACCTGGGATTGCAATTGCAACGCCTCTGCCGCCAAGGCACGAAGCTGTGCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCCGCGCAGGCGCGGGGc < 2:626313/125‑1 (MQ=255) gCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCAc < 2:556573/198‑1 (MQ=255) gCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGATTACAGCATGCTGATCACGCCACCCGCGCCGACTCGCt < 2:745361/193‑1 (MQ=11) gCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGATTACAGCATGCTGATCACGCCACCCGCGCCGACTCGCt > 1:745364/1‑193 (MQ=11) cGACCTGGGATTGCAATTGCAACGCCTGTGTCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGt < 2:345750/151‑1 (MQ=255) ccggggATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAg < 2:467110/151‑1 (MQ=255) tGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGttt < 2:647984/148‑1 (MQ=255) gATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCAc < 2:858882/186‑1 (MQ=255) attgcaaCGCCGGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGc < 2:22607/199‑1 (MQ=255) ttgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTGATCACGCCACCCGCGCCGACTCGCt < 2:812989/173‑1 (MQ=11) ttgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTGATCACGCCACCCGCGCCGACTCGCt > 1:812992/1‑173 (MQ=11) ttgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGATTAc > 2:818430/1‑139 (MQ=255) ttgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGATTAc < 1:818433/139‑1 (MQ=255) tgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGATTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGACCAGGCGCGATGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCg > 2:382549/1‑234 (MQ=255) aaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGt < 1:430110/216‑1 (MQ=255) aaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGt > 2:430107/1‑216 (MQ=255) cGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGc < 2:492211/97‑1 (MQ=255) gCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACg < 2:741256/172‑1 (MQ=255) ccTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGGCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAg < 2:125412/133‑1 (MQ=255) cggtgCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGCAGAGGTTGGGCGAGAAAGTCATGCCGCCGATGGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATaac < 1:277442/142‑1 (MQ=255) tgtgCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGGTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGCCAGGccccg > 2:179143/1‑177 (MQ=255) gtgCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGATTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGACCAGGCGCGATGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGcc < 1:382552/235‑1 (MQ=255) ccgccAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGt > 1:459653/1‑222 (MQ=255) ggCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCg < 2:389670/145‑1 (MQ=255) cGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGc < 1:552577/176‑1 (MQ=255) cGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCa > 1:740135/1‑236 (MQ=255) gggTCATCTGGTCGGGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCt < 2:30382/109‑1 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGc < 1:654322/204‑1 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGc > 2:654319/1‑204 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTg > 2:756772/1‑221 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGa > 2:327344/1‑231 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGAcg > 2:792757/1‑233 (MQ=255) gggCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCa > 2:108530/1‑137 (MQ=255) agaAAGTCATGCCGCCGATTGTGCCAGACCAGGCGCGATGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCGCCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTc < 1:559341/166‑1 (MQ=255) agaAAGTCATGCCGCCGATTGTGCCAGACCAGGCGCGATGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTc > 2:559338/1‑166 (MQ=255) aaGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACg < 1:786641/236‑1 (MQ=255) tCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACg < 2:365808/233‑1 (MQ=255) ccgATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCAc < 1:792760/236‑1 (MQ=255) aTTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCa < 1:381068/112‑1 (MQ=255) aTTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCa > 2:381065/1‑112 (MQ=255) ccAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGc < 2:548330/231‑1 (MQ=255) | CAAGTTGCTTTGCGCCGGGCTGATTTGCTCGCTGCGCTTGGCAAACTTGTGCCGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGC > AE015451/4475320‑4475779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |