| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 4,475,598 | T→A | 7.6% | intergenic (‑63/+1) | PP_3964 ← / ← PP_3965 | transposase/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 4,475,598 | 0 | T | A | 7.6% | 178.6 / 6.4 | 53 | intergenic (‑63/+1) | PP_3964/PP_3965 | transposase/transposase |
| Reads supporting (aligned to +/- strand): ref base T (16/32); new base A (2/2); total (19/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.05e-02 | |||||||||||
CGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGTTAGCCCGGCGATTGGC > AE015451/4475372‑4475808 | cGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGtt > 1:262825/1‑228 (MQ=255)cGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCAt > 1:21414/1‑236 (MQ=255) cTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGa < 2:587541/230‑1 (MQ=255) tGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCt < 1:925664/235‑1 (MQ=255) aGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAg < 1:45216/236‑1 (MQ=255) cATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGc < 1:904666/236‑1 (MQ=255) gAATCGTCCTGCTCATCGCCTCGACCTGGGATGGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCCAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGCCCGGCCAAATGGCCGGCGTTTACAg < 2:580586/178‑1 (MQ=255) aTCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACgcgc < 1:46471/207‑1 (MQ=255) cTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCAc < 2:21414/193‑1 (MQ=255) tGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAgttgt < 1:504678/236‑1 (MQ=255) tCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGc < 1:758970/234‑1 (MQ=255) gCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCAc < 2:556573/198‑1 (MQ=255) gCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGATTACAGCATGCTGATCACGCCACCCGCGCCGACTCGCt < 2:745361/193‑1 (MQ=11) gCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGATTACAGCATGCTGATCACGCCACCCGCGCCGACTCGCt > 1:745364/1‑193 (MQ=11) cGACCTGGGATTGCAATTGCAACGCCTGTGTCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGt < 2:345750/151‑1 (MQ=255) ccggggATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAg < 2:467110/151‑1 (MQ=255) tGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGttt < 2:647984/148‑1 (MQ=255) gATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCAc < 2:858882/186‑1 (MQ=255) attgcaaCGCCGGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGc < 2:22607/199‑1 (MQ=255) ttgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTGATCACGCCACCCGCGCCGACTCGCt < 2:812989/173‑1 (MQ=11) ttgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTGATCACGCCACCCGCGCCGACTCGCt > 1:812992/1‑173 (MQ=11) ttgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGATTAc > 2:818430/1‑139 (MQ=255) ttgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGATTAc < 1:818433/139‑1 (MQ=255) tgcaaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGATTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGACCAGGCGCGATGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCg > 2:382549/1‑234 (MQ=255) aaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGt < 1:430110/216‑1 (MQ=255) aaCGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGt > 2:430107/1‑216 (MQ=255) gCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACg < 2:741256/172‑1 (MQ=255) ccTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGGCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAg < 2:125412/133‑1 (MQ=255) cggtgCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGCAGAGGTTGGGCGAGAAAGTCATGCCGCCGATGGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATaac < 1:277442/142‑1 (MQ=255) tgtgCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGGTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGCCAGGccccg > 2:179143/1‑177 (MQ=255) gtgCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGATTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGACCAGGCGCGATGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGcc < 1:382552/235‑1 (MQ=255) ccgccAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGt > 1:459653/1‑222 (MQ=255) ggCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCg < 2:389670/145‑1 (MQ=255) cGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGc < 1:552577/176‑1 (MQ=255) cGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCa > 1:740135/1‑236 (MQ=255) gggTCATCTGGTCGGGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCt < 2:30382/109‑1 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGc > 2:654319/1‑204 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGc < 1:654322/204‑1 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTg > 2:756772/1‑221 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGa > 2:327344/1‑231 (MQ=255) tGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGAcg > 2:792757/1‑233 (MQ=255) gggCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCa > 2:108530/1‑137 (MQ=255) agaAAGTCATGCCGCCGATTGTGCCAGACCAGGCGCGATGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCGCCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTc < 1:559341/166‑1 (MQ=255) agaAAGTCATGCCGCCGATTGTGCCAGACCAGGCGCGATGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTc > 2:559338/1‑166 (MQ=255) aaGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACg < 1:786641/236‑1 (MQ=255) tCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACg < 2:365808/233‑1 (MQ=255) ccgATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCAc < 1:792760/236‑1 (MQ=255) aTTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCa > 2:381065/1‑112 (MQ=255) aTTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCa < 1:381068/112‑1 (MQ=255) ccAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGc < 2:548330/231‑1 (MQ=255) aGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGTTAGCCCGGCGATTGGc < 1:756775/235‑1 (MQ=255) gTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCg < 2:924358/187‑1 (MQ=255) ccAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCGGCCACGGCAGGCCCAGCACCAACGCACGGAgttgtt > 2:176565/1‑89 (MQ=255) aaaTGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCa < 1:925284/182‑1 (MQ=255) aaaTGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCa > 2:925281/1‑182 (MQ=255) cGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGa > 1:131057/1‑167 (MQ=255) | CGTTTGAGCAGGGCGATTTCGAACTTGAACTGTTCGATGAGGATTTCATCGTTCTGAATCTTCCTGCTCATCGCCTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGTTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCGCGGGGCGACGACAAGTAGACCGGCCAAATGGCCGGCGTTTACAGCATGCTAATCACACCGCCTGCACCGACGCGCTGCCACGGCAGGCCCAGCACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCAGCCGTGGCGAATGCCGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGTTAGCCCGGCGATTGGC > AE015451/4475372‑4475808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |