| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 5,064,851 | G→T | 5.9% | T49K (ACG→AAG) | PP_4461 ← | Major facilitator family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 5,064,851 | 0 | G | T | 5.9% | 279.0 / 2.0 | 79 | T49K (ACG→AAG) | PP_4461 | Major facilitator family transporter |
| Reads supporting (aligned to +/- strand): ref base G (40/34); new base T (3/2); total (43/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTCAACATGACTAGCAGAATTGGAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATGATTCGTTTTTATTTTCCATCCCGCATAGCAAGGC > AE015451/5064635‑5065084 | ctcAACATGACTAGCAGAATTGGAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGaa > 1:717956/1‑236 (MQ=255) tcAACATGACTAGCAGAATTGTAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGaa < 1:337404/235‑1 (MQ=255) aaCATGACTAGCAGAATTGGAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCTTTTCATCAACGt > 1:729812/1‑226 (MQ=255) gCAGAATTGGAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAaaca > 2:776513/1‑228 (MQ=255) cAGAATTGGAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGa > 1:281567/1‑236 (MQ=255) ggAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTc > 2:554752/1‑234 (MQ=255) gAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCTGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCTTTTCATCAACGt > 1:327213/1‑207 (MQ=255) gAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGt > 2:376466/1‑232 (MQ=255) gAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTa > 1:651825/1‑236 (MQ=255) aCCAACGCCAATAGTCTCGTATGTTGGAACCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCa < 1:482033/235‑1 (MQ=255) aCGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGtt > 2:222146/1‑189 (MQ=255) tAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCa < 1:414633/224‑1 (MQ=255) tGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTGAGCGAtt > 1:434026/1‑204 (MQ=255) tCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCTGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGa > 1:912773/1‑180 (MQ=255) tacTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCAAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTggg < 1:750959/164‑1 (MQ=255) cTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAaacaa > 2:102119/1‑170 (MQ=255) cTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCaaa > 1:181138/1‑191 (MQ=255) cTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCAc < 1:569972/235‑1 (MQ=255) ccGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTaa < 2:274584/213‑1 (MQ=255) gATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAAACGTAAACTTCCAGTAAGTTTCCACTTCCAg > 2:106568/1‑236 (MQ=255) aTTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCCGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGa > 2:55266/1‑157 (MQ=255) aTTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGt > 1:186006/1‑219 (MQ=255) aTTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGa > 1:254426/1‑236 (MQ=255) aTTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGa > 1:163019/1‑236 (MQ=255) aTTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGACCCGTAAGCAGCGAACGTCTGCAACAAGGATGTAGTTTCATCAAAGTTTGTGAAAAACAACTTAGCGATGGTCgac > 1:130976/1‑178 (MQ=255) aaaTAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTTGGTAGCTACCTAGCGGCCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGCGAAAAACAACTTAGCGac > 1:830754/1‑162 (MQ=255) ataatCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGAGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGc < 1:376469/236‑1 (MQ=255) agcaTCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAAATTAGCGATGGTCGTAGCAAAAAATGCa > 2:873944/1‑168 (MQ=255) cgcgGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCt > 1:695909/1‑234 (MQ=255) gcgGGCTTGCGCCCCCTTTTGTCACCGATTCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGaa < 2:33114/128‑1 (MQ=255) gcgGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGt < 1:222148/236‑1 (MQ=255) gCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGTTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCa < 1:580266/215‑1 (MQ=255) cccccTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGaaa > 2:438233/1‑163 (MQ=255) ccGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGt < 1:438850/185‑1 (MQ=255) ccGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTc < 1:936601/207‑1 (MQ=255) cGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTttc > 1:519849/1‑236 (MQ=255) aTGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCa > 1:854450/1‑197 (MQ=255) gCGACCAATTACGTAGGTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTCAGCGATGGTCGTAGCAAACAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTtcttct < 1:517987/236‑1 (MQ=255) cGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCAt > 1:89541/1‑224 (MQ=255) gACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACt < 1:918607/137‑1 (MQ=255) gACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACt > 2:918604/1‑137 (MQ=255) tAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAg < 1:117660/208‑1 (MQ=255) gCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGc < 2:695906/233‑1 (MQ=255) gCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCAcc < 1:191926/236‑1 (MQ=255) aCCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCa > 1:313641/1‑236 (MQ=255) ccTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGt > 1:631600/1‑188 (MQ=255) ccTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGt < 2:631597/188‑1 (MQ=255) ccTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGtttt > 2:719967/1‑200 (MQ=255) tAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCAc > 2:565227/1‑234 (MQ=255) tAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGt > 1:380149/1‑236 (MQ=255) tCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGcc > 1:666788/1‑236 (MQ=255) gggCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACg > 1:621445/1‑158 (MQ=255) gggCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTa > 2:25432/1‑191 (MQ=255) gggCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGAtt > 2:740349/1‑200 (MQ=255) taggAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCTTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTttctt < 2:287858/198‑1 (MQ=255) tATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCTTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTttctt > 1:287861/1‑201 (MQ=255) tATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATCTTGTTTTAGTCATGATTTTCTTCTATCGAGTCggg > 2:199546/1‑214 (MQ=255) tGAAAACCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTcc < 2:276856/168‑1 (MQ=255) aaCCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCggg < 1:25432/235‑1 (MQ=255) aaCCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCggg < 1:75561/235‑1 (MQ=255) aCCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATAtt > 2:611016/1‑175 (MQ=255) ccGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCaa < 1:426526/236‑1 (MQ=255) cGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCAcc < 2:313638/224‑1 (MQ=255) gCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATg < 1:167223/236‑1 (MQ=255) ccccGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGc < 2:554757/88‑1 (MQ=255) ccccGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGc > 1:554760/1‑88 (MQ=255) cGTAAGCATCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAATAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGt < 2:886497/117‑1 (MQ=255) cGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCGAGTAAGTTTCCACTTcc > 1:518171/1‑127 (MQ=255) gTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCAcc < 1:833989/218‑1 (MQ=255) gcagcGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCg > 1:934724/1‑219 (MQ=255) agcGAACGTCTGCAACAAGGATGTCTTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACg < 2:89541/202‑1 (MQ=255) agcGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGc < 1:776516/78‑1 (MQ=255) aCGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATGATTCGTTTTTAtttt < 1:613654/235‑1 (MQ=255) gCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATGATTCGTTTTTATTTTCCATccc < 2:110342/236‑1 (MQ=255) aGGATGTAGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATGATTCGTTTTTATTTTCCATCCCGCATAg < 1:254633/236‑1 (MQ=255) aTGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATCCATACACTCCTAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATGATTCGTTTTTATTTTCCATCCCGCATAg > 2:804262/1‑233 (MQ=255) tCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGa < 2:828391/164‑1 (MQ=255) cGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATGATTCGTTTTTATTTTCCATCCCGCATAGCAAGGc < 1:605297/235‑1 (MQ=255) cGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATGATTCGTTTTTATTTTCCATCCCGCATAGCAAGGc < 1:314388/235‑1 (MQ=255) gTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATGATTCGTTTTTATTTTCCATCCCGCATAGCAAGGc > 2:545957/1‑234 (MQ=255) | CTCAACATGACTAGCAGAATTGGAGCACCAACGCCAATAGTCTCGTATGTTGGAATCAGACCAATACCAATACTGCCGATTGCCATGCAAATAATCGTCAGCAGCATCGCGGGCTTGCGCCCCCTTTTGTCACCGATGCGACCAATTACGTAGCTACCTAGCGGTCGGGCTATGAAACCCGCCCCGTAAGCAGCGAACGTCTGCAACAAGGATGTCGTTTCATCAACGTTTGGGAAAAACAACTTAGCGATGGTCGTAGCAAAAAATGCATACACTGCGAAATCGTAAACTTCCAGTAAGTTTCCACTTCCAGAAGTAGCCACGGCAAACCAGGTCTTCCTGGTAGATATTGTTTTAGTCATGATTTTCTTCTATCGAGTAGGGCACCGCACGTAACGCCACCGTGCGGGGCAATGATTCGTTTTTATTTTCCATCCCGCATAGCAAGGC > AE015451/5064635‑5065084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |