| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 213,874 | T→G | 11.0% | T6460T (ACT→ACG) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 213,874 | 0 | T | G | 11.0% | 177.2 / 6.2 | 58 | T6460T (ACT→ACG) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base T (25/26); new base G (5/2); total (30/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
AAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGAC > AE015451/213645‑214102 | aaGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTca > 1:26280/1‑232 (MQ=255)aaGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGt < 1:409510/235‑1 (MQ=255) ccTGCCGATCAACAACCCCAGTGCAGTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACcgac < 1:244674/235‑1 (MQ=255) cGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGcc < 1:85888/235‑1 (MQ=255) aCCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCac > 2:644215/1‑222 (MQ=255) ttCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACcga > 1:641010/1‑203 (MQ=255) gCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCa > 1:77534/1‑218 (MQ=255) gCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACg > 1:201731/1‑216 (MQ=255) gACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCa < 1:550452/235‑1 (MQ=255) ccGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGGGCGGACGTCGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACtt > 1:192758/1‑171 (MQ=255) aCCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGa < 1:410151/235‑1 (MQ=255) gCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTgg > 1:786357/1‑235 (MQ=255) tGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGc > 1:418742/1‑223 (MQ=255) tGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTc < 2:298395/181‑1 (MQ=255) cGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTc < 1:31726/220‑1 (MQ=255) tCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGACGGCGACCGGGTCAAgg > 2:771804/1‑170 (MQ=255) cGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAAc > 1:289873/1‑236 (MQ=255) ggACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGt > 2:732993/1‑168 (MQ=255) ggACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTc < 1:472118/208‑1 (MQ=255) ccAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGc > 2:617283/1‑134 (MQ=255) ccAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGc < 1:617286/134‑1 (MQ=255) aCCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTg < 1:407563/236‑1 (MQ=255) gTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACTCCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCGCACGACCTGGTCGTGcccc > 1:680153/1‑235 (MQ=255) cGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTa < 2:798720/104‑1 (MQ=255) cGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCt > 2:514998/1‑210 (MQ=255) cGTGATGTCGATCGCTACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACACTGGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTa > 1:798723/1‑104 (MQ=255) gTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGAc > 1:6446/1‑182 (MQ=255) tGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCAcc < 2:331671/143‑1 (MQ=255) tGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCAcc > 1:331674/1‑143 (MQ=255) aTGTCGATCGCTACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGca < 1:913105/235‑1 (MQ=255) tcgatcgaTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGcaaca < 1:251259/235‑1 (MQ=255) tCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGcaaca > 1:629249/1‑235 (MQ=255) gATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCATCTGACACTCGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTAGCCGAGAACGTCaa > 2:878597/1‑168 (MQ=255) gATCGCTACCGATGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCt < 1:788097/176‑1 (MQ=255) cGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGcc > 1:365052/1‑235 (MQ=255) cGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCt > 1:217476/1‑222 (MQ=255) gCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCaa > 2:813578/1‑233 (MQ=255) ggACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCa > 2:45452/1‑107 (MQ=255) ggACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGcac > 1:2460/1‑209 (MQ=255) aCGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCAGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGc < 1:735656/174‑1 (MQ=255) cGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGAccg > 2:266525/1‑124 (MQ=255) ttGGCAAGTTCAAGCAACTGCCACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCAccgcc < 2:287719/113‑1 (MQ=255) aaGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGc > 2:777538/1‑166 (MQ=40) gTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAgcg < 1:486011/236‑1 (MQ=40) acacTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACg > 2:415509/1‑190 (MQ=18) cgctggACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCaacaac < 1:573259/183‑1 (MQ=255) aCAAGACCCCGGTCAGCACTTCGGTCCCCGACGCGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACg < 2:224459/156‑1 (MQ=255) aGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGa < 1:844352/117‑1 (MQ=255) aGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGa > 2:844349/1‑117 (MQ=255) aGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGACACCAGCGCGCCGTACACCCACGACGCGCa > 1:451880/1‑235 (MQ=255) aGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCa < 1:283255/210‑1 (MQ=40) cccGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTc < 1:84903/106‑1 (MQ=40) cccGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTc > 2:84903/1‑106 (MQ=40) gTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGa < 1:590607/236‑1 (MQ=255) tCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGAc < 1:870678/236‑1 (MQ=255) tCAGCACGTCGGTGACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCa > 2:486261/1‑114 (MQ=255) tCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCa < 1:486264/114‑1 (MQ=38) cAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTg < 2:716694/136‑1 (MQ=255) aCTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTc < 2:287643/96‑1 (MQ=40) ttCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATg > 1:108546/1‑227 (MQ=255) | AAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGTTGGCAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGAC > AE015451/213645‑214102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |