| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 1,142,138 | A→G | 6.8% | S97S (AGT→AGC) | arcD‑I ← | arginine/ornithine antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 1,142,138 | 0 | A | G | 6.8% | 293.0 / 9.1 | 88 | S97S (AGT→AGC) | arcD‑I | arginine/ornithine antiporter |
| Reads supporting (aligned to +/- strand): ref base A (45/37); new base G (3/3); total (48/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.63e-01 | |||||||||||
ACAGGCAGATCAGGGCGAACAGCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCGAGA > AE015451/1141909‑1142349 | aCAGGCAGATCAGGGCGAACAGCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATc < 1:804124/236‑1 (MQ=255) gATCAGGGCGAACAGCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAg < 1:853273/235‑1 (MQ=255) aTCAGGGCGAACAGCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAg < 2:485885/234‑1 (MQ=255) aGGGCGAACAGCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGcccc > 1:385460/1‑235 (MQ=255) agacagccAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAg < 1:630539/230‑1 (MQ=255) gCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAgg > 2:870827/1‑234 (MQ=255) ccacTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAg > 1:825210/1‑236 (MQ=255) acTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGATGGGTGTGTTGCCTTCGCCGAACACCGGGAAGTAGAAGCCCAGGGTGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATGTACTc < 1:194951/236‑1 (MQ=14) ttGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGc > 2:630536/1‑205 (MQ=255) gggCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCGTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAg < 2:131617/202‑1 (MQ=255) ccAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAagcca > 2:709112/1‑227 (MQ=255) ttGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGc > 2:573830/1‑214 (MQ=255) gatgaAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCAc > 1:393409/1‑170 (MQ=255) gatgaAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGgcatacgcat > 1:558347/1‑236 (MQ=255) gatgaAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGgcatacgc < 2:558344/234‑1 (MQ=255) tgaAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAg < 2:738755/179‑1 (MQ=255) ggcTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAg > 1:845934/1‑184 (MQ=255) ccTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTGCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAg < 2:594851/179‑1 (MQ=255) cTTGAGGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTg < 2:268327/211‑1 (MQ=255) tGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCTAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATAGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCAc > 2:69459/1‑153 (MQ=255) taccGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCACATAGTCGCCGAA‑CCAGCCCTGgcataagca > 1:717083/3‑214 (MQ=255) tGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATc > 2:387133/1‑155 (MQ=255) accGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTa > 1:481544/2‑159 (MQ=255) accGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTa < 2:481541/158‑1 (MQ=255) gcAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGAGGTTGCGCAGCCAGGCACTGATACAGTAGc > 2:500204/1‑156 (MQ=255) aGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGccgc > 1:899558/1‑155 (MQ=255) aGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGt > 1:422543/1‑226 (MQ=255) aGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGGAGcc > 2:747071/1‑155 (MQ=255) cAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTgg < 1:709115/236‑1 (MQ=255) aaGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAg < 1:682598/236‑1 (MQ=255) ggCACCGCCCACAACAGGATCGACGCGCCAATGATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGgcgtaggcat < 2:251619/195‑1 (MQ=255) gCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCCTGGCATACGCATACACCCCCCCATCCAg > 1:229061/1‑211 (MQ=255) gCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCGTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGa < 2:18803/174‑1 (MQ=255) gCACCCCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAgg < 1:401069/153‑1 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTc > 1:619836/1‑167 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTc < 2:619833/167‑1 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTgg < 2:152044/184‑1 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTgg > 1:152045/1‑184 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTgg > 1:566193/1‑226 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGc > 1:418584/1‑227 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTg > 2:476246/1‑236 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTg > 1:426536/1‑236 (MQ=255) cGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAg > 1:415306/1‑163 (MQ=255) ccACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAac < 1:389794/235‑1 (MQ=255) acaacaGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCa > 2:697788/1‑201 (MQ=255) acaacaGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACg > 1:495473/1‑236 (MQ=255) caacaGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCATTGGCATACGCATACACCCCACCATCCATGTCgg > 1:738014/1‑206 (MQ=255) acaGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg < 1:387136/236‑1 (MQ=255) cGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGc > 2:617717/1‑140 (MQ=255) cgcgCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATc < 2:638081/112‑1 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCAc > 1:104155/1‑105 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCAc < 2:104155/105‑1 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGc > 1:304296/1‑205 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACAGGaa > 2:842894/1‑223 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGaa < 1:842897/223‑1 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGAGCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGt < 1:234652/211‑1 (MQ=255) gcCAATTATGGCGGCTGGGGTGTTGACTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGGCGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAg < 2:400949/234‑1 (MQ=255) cAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAac > 2:513926/1‑215 (MQ=255) cAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAgg < 2:422540/227‑1 (MQ=255) aTTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACAcc < 1:75397/171‑1 (MQ=255) aTTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACAcc > 2:75397/1‑171 (MQ=255) gcggcTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGtt < 1:1328/191‑1 (MQ=255) gcggcTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTc < 2:304293/201‑1 (MQ=255) tGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCTACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGa > 1:473679/1‑200 (MQ=255) gggTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATc > 1:860010/1‑236 (MQ=255) tgtTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGcc < 1:38672/236‑1 (MQ=255) tgtTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGcc < 1:498616/236‑1 (MQ=255) cTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGcc < 1:697791/235‑1 (MQ=255) gAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg > 1:388817/1‑190 (MQ=255) ccGGGAAGTAGAAGCCCAGGGTGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg > 2:275196/2‑185 (MQ=255) ccGGGAAGTAGAAGCCCAGGGTGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg < 1:275199/184‑1 (MQ=255) gCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTgcga > 2:645962/1‑235 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATc < 2:860546/50‑1 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATc > 1:860549/1‑50 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATGTAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAg > 2:458424/1‑127 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCa < 2:685031/126‑1 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCa > 1:685034/1‑126 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACCGCGGTGATCCCCCAGc > 2:682192/1‑201 (MQ=255) tGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg < 1:167687/164‑1 (MQ=255) tGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg > 2:167686/1‑164 (MQ=255) gCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGcc < 2:668990/145‑1 (MQ=255) cTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGTCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTg > 2:658339/1‑184 (MQ=255) caCGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGa < 2:406331/179‑1 (MQ=255) caCGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGa > 1:406334/1‑179 (MQ=255) gAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTgcgc < 1:41114/212‑1 (MQ=255) tAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCgaga < 1:932075/235‑1 (MQ=255) gTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGGCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCg > 2:288383/1‑160 (MQ=255) ggCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCAGGCCGACTGCGGTGATCGCCCAGCCGATCAGTACggg > 1:152538/1‑173 (MQ=255) | ACAGGCAGATCAGGGCGAACAGCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCGAGA > AE015451/1141909‑1142349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |