| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 1,142,159 | T→C | 5.3% | S90S (TCA→TCG) | arcD‑I ← | arginine/ornithine antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 1,142,159 | 0 | T | C | 5.3% | 257.3 / 3.6 | 76 | S90S (TCA→TCG) | arcD‑I | arginine/ornithine antiporter |
| Reads supporting (aligned to +/- strand): ref base T (39/33); new base C (2/2); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.01e-01 | |||||||||||
ACAGCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCGAGAAGATACCGCCGCCAATCATCGAGCCGACGACA > AE015451/1141927‑1142381 | agacagccAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAg < 1:630539/230‑1 (MQ=255) gCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAgg > 2:870827/1‑234 (MQ=255) ccacTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAg > 1:825210/1‑236 (MQ=255) acTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGATGGGTGTGTTGCCTTCGCCGAACACCGGGAAGTAGAAGCCCAGGGTGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATGTACTc < 1:194951/236‑1 (MQ=14) ccAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAagcca > 2:709112/1‑227 (MQ=255) ttGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGc > 2:573830/1‑214 (MQ=255) gatgaAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGgcatacgcat > 1:558347/1‑236 (MQ=255) gatgaAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGgcatacgc < 2:558344/234‑1 (MQ=255) ggcTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAg > 1:845934/1‑184 (MQ=255) ccTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTGCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAg < 2:594851/179‑1 (MQ=255) cTTGAGGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTg < 2:268327/211‑1 (MQ=255) taccGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCACATAGTCGCCGAA‑CCAGCCCTGgcataagca > 1:717083/3‑214 (MQ=255) aGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGt > 1:422543/1‑226 (MQ=255) cAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTgg < 1:709115/236‑1 (MQ=255) aaGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAg < 1:682598/236‑1 (MQ=255) ggCACCGCCCACAACAGGATCGACGCGCCAATGATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGgcgtaggcat < 2:251619/195‑1 (MQ=255) gCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCCTGGCATACGCATACACCCCCCCATCCAg > 1:229061/1‑211 (MQ=255) gCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCGTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGa < 2:18803/174‑1 (MQ=255) gCACCCCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAgg < 1:401069/153‑1 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTc < 2:619833/167‑1 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTc > 1:619836/1‑167 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTgg < 2:152044/184‑1 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTgg > 1:152045/1‑184 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTgg > 1:566193/1‑226 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGc > 1:418584/1‑227 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTg > 2:476246/1‑236 (MQ=255) aCCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTg > 1:426536/1‑236 (MQ=255) cGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAg > 1:415306/1‑163 (MQ=255) ccACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAac < 1:389794/235‑1 (MQ=255) acaacaGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCa > 2:697788/1‑201 (MQ=255) acaacaGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACg > 1:495473/1‑236 (MQ=255) caacaGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCATTGGCATACGCATACACCCCACCATCCATGTCgg > 1:738014/1‑206 (MQ=255) acaGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg < 1:387136/236‑1 (MQ=255) cGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGc > 2:617717/1‑140 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGc > 1:304296/1‑205 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACAGGaa > 2:842894/1‑223 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGaa < 1:842897/223‑1 (MQ=255) cgcCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGAGCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGt < 1:234652/211‑1 (MQ=255) gcCAATTATGGCGGCTGGGGTGTTGACTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGGCGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAg < 2:400949/234‑1 (MQ=255) cAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAac > 2:513926/1‑215 (MQ=255) cAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAgg < 2:422540/227‑1 (MQ=255) aTTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACAcc < 1:75397/171‑1 (MQ=255) aTTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACAcc > 2:75397/1‑171 (MQ=255) gcggcTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGtt < 1:1328/191‑1 (MQ=255) gcggcTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTc < 2:304293/201‑1 (MQ=255) tGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCTACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGa > 1:473679/1‑200 (MQ=255) gggTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATc > 1:860010/1‑236 (MQ=255) tgtTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGcc < 1:498616/236‑1 (MQ=255) tgtTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGcc < 1:38672/236‑1 (MQ=255) cTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGcc < 1:697791/235‑1 (MQ=255) gAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg > 1:388817/1‑190 (MQ=255) ccGGGAAGTAGAAGCCCAGGGTGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg > 2:275196/2‑185 (MQ=255) ccGGGAAGTAGAAGCCCAGGGTGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg < 1:275199/184‑1 (MQ=255) gCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTgcga > 2:645962/1‑235 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATGTAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAg > 2:458424/1‑127 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCa > 1:685034/1‑126 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCa < 2:685031/126‑1 (MQ=255) tGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACCGCGGTGATCCCCCAGc > 2:682192/1‑201 (MQ=255) tGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg < 1:167687/164‑1 (MQ=255) tGCTGAACAGCAGCACGAAATAGCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAg > 2:167686/1‑164 (MQ=255) gCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGcc < 2:668990/145‑1 (MQ=255) cTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGTCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTg > 2:658339/1‑184 (MQ=255) caCGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGa > 1:406334/1‑179 (MQ=255) caCGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGa < 2:406331/179‑1 (MQ=255) gAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTgcgc < 1:41114/212‑1 (MQ=255) tAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCgaga < 1:932075/235‑1 (MQ=255) gTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGGCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCg > 2:288383/1‑160 (MQ=255) ggCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCAGGCCGACTGCGGTGATCGCCCAGCCGATCAGTACggg > 1:152538/1‑173 (MQ=255) cAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGttt > 2:852695/1‑192 (MQ=255) cAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCGAGAAGATACCGCCGCCAATCATCGAGCCgacgac > 1:123884/1‑236 (MQ=255) cAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCGAGAAGATACCGCCGCCAATCATCGAGCCgacgac < 1:482337/236‑1 (MQ=255) gCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCGCTGCGCTGGCGGCCATGTTTTGTGGCAGCGAGATGATa > 2:843314/1‑205 (MQ=255) ccAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCGAGAAGATACCGCCGCCAATCATCGAGCCgacgacc > 2:415908/1‑228 (MQ=255) ccAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCCGCCATGTTTTGTgg < 1:384537/189‑1 (MQ=255) cAGGCTGAGGAAAAGCCCATATAGTCTCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGcc < 2:643340/143‑1 (MQ=255) aGGATGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTg < 2:80915/83‑1 (MQ=255) tGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCGAGAAGATACCGCCGCCAATCATCGAg < 2:536982/214‑1 (MQ=255) | ACAGCACCAGCGGCACCACTTTGGCCACAGTGGTGACCAAGTTGATGAAGGCGGCTTCCTTGATGCCGCGCAGTACCAGGAAGTGCACCGCCCACAACAGGATCGACGCGCCAATTATGGCGGCTGGGGTGTTGCCTTCACCGAAGATCGGGAAGAAGTAGCCCAGGGTGCTGAACAGCAGCACGAAGTAGCCGACGTTGCCCAGCCAGGCACTGATCCAGTAGCCCCAGGCTGAGGAAAAGCCCATATAGTCGCCGAAGCCAGCCTTGGCATACGCATACACCCCACCATCCAGGTCGGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGTCAGCATGCCGACTGCGGTGATCGCCCAGCCGATCAGTACGGCCCCAACCCCTGCGCTGGCGGCCATGTTTTGTGGCAGCGAGAAGATACCGCCGCCAATCATCGAGCCGACGACA > AE015451/1141927‑1142381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |