New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	470897 =	74 (0.860)	6 (0.070)	6/342	NT	8.2%	coding (60/3744 nt)	PP_0386	Sensory box protein
	?	AE015451	470946 =	63 (0.760)					coding (11/3744 nt)	PP_0386	Sensory box protein

CGCCACCCGACTCGCAGCGAGCACCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/471131‑470897 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCG  >  AE015451/470946‑471072                                                                                                                                                                                                                                                                                                                                                                            CGCCACCCGACTCGCAGCGAGCACCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC                                                                                                                                 <  1:115283/235‑1                             GCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGCCTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGc                                                                                                                                      >  1:478801/1‑201                                        GACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGCTTCAAGGACATGGCAGCCTCGCACTC                                                                                                       <  1:1300205/222‑1                                                  GACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC                                                                                                                                 <  2:279642/186‑1                                                                        gtGTTTTTCTTTAGTGGCCCTTGACATAACGCCCGCCTTCCGTTGCACCCCTGCGGCAATGCCCGTCTACACTCGCCTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGG                                                                                                                                      <  2:310527/157‑1                                                                                        GCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAG                                                                                                     <  1:898434/176‑1                                                                                                             TTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGT                                                                                                >  1:21806/1‑160                                                                                                             TTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGT                                                                                                <  2:21806/160‑1                                                                                                              TCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCC                                                                                                                                    >  2:1625/1‑123                                                                                                               CCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGCGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC                                                                                                                                 <  2:1457508/125‑1                                                                                                                                 ccTGCCCGTCTACAGTCGACTTCAGCCTCCCGGAGTGCGACGCTGCCATGTCCCTGAAGCTGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC                                                                                                                                 <  2:1238830/105‑1                                                                                                                                         tcgACACTCGACTTCAGACCACCTGAGTGCGAGGCGGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGGTTTTGTGGAACAGAACGGCCGGC                                                                                                                                 <  2:37885/96‑1                                                                                                                                                  GACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGAGCCTGATTTTGTGGAACACAACGGCTGGCTTCAAGGACATGGCAACCTCGCACTCAGGTGGTCGGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAA                                                   <  1:163946/168‑1                                                                                                                                                             ACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCGTTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGC                                                                                                                                     <  2:830936/75‑1                                                                                                                                                             ACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGC                                                                                                                                     >  1:830938/1‑75                                                                                                                                                                       GAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCA                                                                 <  2:819332/133‑1                                                                                                                                                                                                                                       CCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGGTTTATGTCATGGTCCACTACAGA                     >  2:1135786/1‑113                                                                                                                                                                                                                                       CCGGCTTCAAGGACATGGCAGCCTCGCACTCA                                                                                                      >  2:278780/1‑32                                                                                                                                                                                                                                         GGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCAGGGGCCACTAAAGAAAAACCCCGGCCTGGGCCG  >  1:879629/1‑130                                                                                                                                                                                                                                          GCTTTAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGC    <  2:1214544/127‑1                                                                                                                                                                                                                                                                                                                                                                            CGCCACCCGACTCGCAGCGAGCACCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/471131‑470897 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCG  >  AE015451/470946‑471072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.