New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	873907 =	55 (0.640)	5 (0.060)	4/342	NT	8.4%	coding (265/621 nt)	PP_0758	conserved protein of unknown function
	?	AE015451	873953 =	56 (0.680)					coding (311/621 nt)	PP_0758	conserved protein of unknown function

TCGGCGTGTCCGGGTCAAGCCAGGCCGCCTGCCCCGCTTCGTCGAGGATGAGCGGCCGACGCTGATTCATGGCCGCCTGGGTCACCACCGCGCAACTCAGCCATACCTGGTCCTGCACCGGATAGGCCTCCCACACCGCCGCAAAGTACAGCGACGCGCCCTCCCCCGGGGTCAACCAGAACGGGCGTTTGCGCACGCTGCCACGCCATTCGTAAAAGCCGTTGGCCGGCATCAGGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/874147‑873907 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcgTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGACCCGGACACGCCGATTACCCGCTTGCACGAGCTGCT  >  AE015451/873953‑874169                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCGGCGTGTCCGGGTCAAGCCAGGCCGCCTGCCCCGCTTCGTCGAGGATGAGCGGCCGACGCTGATTCATGGCCGCCTGGGTCACCACCGCGCAACTCAGCCATACCTGGTCCTGCACCGGATAGGCCTCCCACACCGCCGCAAAGTACAGCGACGCGCCCTCCCCCGGGGTCAACCAGAACGGGCGTTTGCGCACGCTGCCACGCCATTCGTAAAAGCCGTTGGCCGGCATCAGG                                                                                                                                                                                                                                <  1:588545/236‑1                                                                                   CACCACCGCGCAACTCAGCCATACCTGGTCCTGCACCGGATAGGCCTCCCACACCGCCGCAAAGTACAGCGACGCGCCCTCCCCCGGGGTCAACCAGAACGGGCGTTTGCGCACGCTGCCACGCCATTCGTAAAAGCCGTTGGCCGGCATCAGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGC                                                                                                                                                                                     <  2:673728/197‑1                                                                                                             GGTCCTGCACCGGCTAGGCCTCCCACACCGCCGCAAAGTACAGCGACGCGCCCTCCCCCGCGCTCAACCAGAACGGGCGTTTGCGCACGCTGCCACGCCGTTCGTAAAAGCCGTTGGCCGGCGTCGGGCAGC                                                                                                                                                                                                                            >  2:901676/1‑132                                                                                                                             GGCCTCCCACACCGCCGCAAAGTACAGCGACGCGCCCTCCCCCGGGGTCAACCAGAACGGGCGTTTGCGCACGCTGCCACGCCATTCGTAAAAGCCGTTGGCCGGCATCAGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCG                                                                                                                                                                   <  1:1286902/173‑1                                                                                                                               cccCCCACCCCGCCGCAAAGTACAGCGACGCGCCCTCCCCCGGGGTCAACCAGAACGGGCGTTTGCGCACGCTGCCACGCCATTCGTAAAAGCCGTTGGCCGGCATCGGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGC                                                                                                                                                                                     <  2:188867/150‑1                                                                                                                                                        CGACGCGCCCTCCCCCGGGGTCAACCAGAACGGGCGTTTGCGCACGCTGCCACGCCATTCGTAAAAGCCGTTGGCCGGCATCAGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTG                                                                                                                                                             <  2:1398132/152‑1                                                                                                                                                                                       GGGCGTTTGCGCACGCTGCCACGCCATTCGTAAAAGCCGTTGGCCGGCATCAGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACC                                                                                                                                    <  1:993207/146‑1                                                                                                                                                                                                        GCCACGCCATTCGTAAAAGCCGTTGGCCGGCATCAGGCAG                                                                                                                                                                                                                             >  2:1166495/1‑40                                                                                                                                                                                                                                           GGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGC                                                                                               >  1:1394583/1‑131                                                                                                                                                                                                                                                CGTGCGCAAACGCCCGTTCTGGTTGCCCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGACCCGGACACGCCGATTACCCGCTTGCACGAGCTGCT  <  1:352267/219‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCGGCGTGTCCGGGTCAAGCCAGGCCGCCTGCCCCGCTTCGTCGAGGATGAGCGGCCGACGCTGATTCATGGCCGCCTGGGTCACCACCGCGCAACTCAGCCATACCTGGTCCTGCACCGGATAGGCCTCCCACACCGCCGCAAAGTACAGCGACGCGCCCTCCCCCGGGGTCAACCAGAACGGGCGTTTGCGCACGCTGCCACGCCATTCGTAAAAGCCGTTGGCCGGCATCAGGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/874147‑873907 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcgTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGACCCGGACACGCCGATTACCCGCTTGCACGAGCTGCT  >  AE015451/873953‑874169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.