New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 981334	86 (1.000)	6 (0.070)	5/336	NT	6.7%	coding (211/1863 nt)	hscA	DnaK‑like molecular chaperone specific for IscU
	?	AE015451	= 981392	85 (1.050)					coding (269/1863 nt)	hscA	DnaK‑like molecular chaperone specific for IscU

CGTGATGGCACCTAAGGTATTCAGATAAGCATGGCCCTACTGCAGATTGCCGAACCCGGTCAAAGCCCTCAGCCGCACCAGCGCCGCCTGGCGGTTGGAATCGACCTGGGTACCACCAACTCAATGGTCGCTGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/981094‑981334 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgcgcCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGGTCGATTCCAACCGCCAGGCGGCGCTGGTGCGGCTGAGG  <  AE015451/981392‑981160                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTGATGGCACCTAAGGTATTCAGATAAGCATGGCCCTACTGCAGATTGCCGAACCCGGTCAAAGCCCTCAGCCGCACCAGCGCCGCCTGGCGGTTGGAATCGACCTGGGTACCACCAACTCAATGGTCGCTGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGC                                                                                                                                                                                                                                                >  1:1238939/1‑236  GTGATGGCACCTAAGGTATTCAGATAAGCATGGCCCTACTGCAGATTGCCGAACCCGGTCAAAGCCCTCAGCCGCACCAGCGCCGCCTGGCGGTTGGAATCGACCTGGGTACCACCAACTCAATGGTCGCTGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGCGGCAG                                                                                                                                                                                                                                                  >  2:908506/1‑233                                                            cCAAAGCCCTCAGCCGCACCAGCGCCGCCTGGCGGTTGGAATCGACCTGGGTACCACCAACTCAATGGTCGCTGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAAC                                                                                                                                                                                                       <  1:332761/217‑1                                                                                                                                             CAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGC                                                                                                                                                                                                                                           >  2:869095/1‑101                                                                                                                                                CGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAAC                                                                                                                                                                                                       >  1:147867/1‑134                                                                                                                                                CGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAAC                                                                                                                                                                                                       <  2:147866/134‑1                                                                                                                                                                                            TGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTC                                                                                                                                                  >  2:763389/1‑143                                                                                                                                                                                                                     AGGGCGCAACGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAG                                                                                                                                           >  2:48279/1‑125                                                                                                                                                                                                                              CGAAGTGGGGCAGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGGGTGCAAAGGGGCG                                                                                                                                                                                                 >  2:388845/1‑62                                                                                                                                                                                                                                         AGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTCCGGCCGCTGCGCAGTGCAGCG                                                                >  2:874432/1‑180                                                                                                                                                                                                                                         AGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTG                                                         >  1:1303063/1‑187                                                                                                                                                                                                                                         AGGCCGCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTC                                                                                         >  2:105127/1‑155                                                                                                                                                                                                                                              GCGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGGTCGATTCCAACCGCCAGGCGGCGCTGGTGCGGCTGAG   >  1:1353062/1‑236                                                                                                                                                                                                                                               CGCCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGGTCGATTCCAACCGCCAGGCGGCGCTGGTGCGGCTGAGG  <  1:1203236/236‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTGATGGCACCTAAGGTATTCAGATAAGCATGGCCCTACTGCAGATTGCCGAACCCGGTCAAAGCCCTCAGCCGCACCAGCGCCGCCTGGCGGTTGGAATCGACCTGGGTACCACCAACTCAATGGTCGCTGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGTAACGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGGGCAGGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/981094‑981334 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgcgcCCCATCAGGCGCTTGACCGACAGCACGGTGTTCAACGGGTCGCTGGAGGCAGCATCACGCGCGGCCTGCCCCACTTCGTTGCGCCCTTCGAGGTAGCGCACCGCGGACGGCAGAATGACGTTACCCTGCGCGTCGGGCAGGGGCTCGCTACGGCCGCTGCGCAGTGCAGCGACCATTGAGTTGGTGGTACCCAGGTCGATTCCAACCGCCAGGCGGCGCTGGTGCGGCTGAGG  <  AE015451/981392‑981160

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.