New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1128396 =	84 (0.980)	4 (0.050)	4/334	NT	5.1%	coding (1155/2856 nt)	gcvP‑I	glycine dehydrogenase
	?	AE015451	1128436 =	71 (0.880)					coding (1115/2856 nt)	gcvP‑I	glycine dehydrogenase

GGCAAAACCGCCCTGCGTCTGGCCATGCAGACCCGCGAGCAGCACATCCGCCGCGAAAAGGCCACCAGCAACATCTGCACCGCCCAGGTGCTGCTGGCCAACATCGCCAGCATGTTCGCCGTGTACCACGGCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1128632‑1128396 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgccttcAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGCTCGCGGGTCTGCATGGCCAGACGCAGGGCGGTTTTGCCGAAGCGGTCGATCGACACGCCGACCAGGCGGCCAG  >  AE015451/1128436‑1128667                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCAAAACCGCCCTGCGTCTGGCCATGCAGACCCGCGAGCAGCACATCCGCCGCGAAAAGGCCACCAGCAACATCTGCACCGCCCAGGTGCTGCTGGCCAACATCGCCAGCATGTTCGCCGTGTACCACGGCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTT                                                                                                                                                                                                                                           <  1:1306189/236‑1  GCAAAACCGCCCTGCGTCTGGCCATGCAGACCCGCGAGCAGCACATCCGCCGCGAAAAGGCCACCAGCAACATCTGCACCGCCCAGGTGCTGCTGGCCAACATCGCCAGCATGTTCGCCGTGTACCACGGCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTT                                                                                                                                                                                                                                           <  1:914144/235‑1                   CTGGCCATGCAGACCCGCGAGCAGCACATCCGCCGCGAAAAGGCCACCAGCAACATCTGCACCGCCCAGGTGCTGCTGGCCAACATCGCCAGCATGTTCGCCGTGTACCACGGCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCC                                                                                                                                                                                                                                             <  2:849178/216‑1                             AGACCCGCGAGCAGCACATCCGCCGCGAAAAGGCCACCAGCAACATCTGCACCGCCCAGGTGCTGCTGGCCAACATCGCCAGCATGTTCGCCGTGTACCACGGCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTT                                                                                                                                                                                                                                           >  2:1309231/1‑208                                                                           CTGCACCGCCCAGGTGCTGCTGGCCACCATCGCCAGCATGTTCGCCGTGTACCACGGCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTT                                                                                                                                                                                                                                           <  1:445132/162‑1                                                                                                       ATCGCCAGCATGTTCGCCGTGTCCCACGCCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTT                                                                                                                                                                                                                                           <  1:255799/134‑1                                                                                                                  GTTCGCCGTGTCCCACGGCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCA                                                                                                                                                                                                                                                  <  1:318877/116‑1                                                                                                                     CGCCGTGTACCACGGCCCTGCCGGTCTCAAGCGCATTGCCGGGCGCACCCACGCCCTGACCGCGATCCCCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCG                                                                                                                                                                              <  2:818155/181‑1                                                                                                                            tcCCACGGCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTG                                                                                                                                                                                                          <  1:206446/144‑1                                                                                                                                                        TTGCCGCGCGCGCCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCA                                                                                                                                                                           <  1:816015/149‑1                                                                                                                                                           CCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAG                                                                                                                                                                                                                                                 >  2:806565/1‑76                                                                                                                                                           CCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAG                                                                                                                                                                                                                                                 <  1:806567/76‑1                                                                                                                                                                                                       AAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGCTCGCGGGTCTGCATGGCCAGACGCAGGGCGG                                            >  2:951045/1‑229                                                                                                                                                                                                                                     aaCGCCTGCAAGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGG                                                                                                                                                                             <  1:478634/68‑1                                                                                                                                                                                                                                     AGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGCTCGCGGGTCTGCATGGCCAGACGCAGGGCGGTTTTGCCGAAGCGGTCGATCGACACGCCGACCAGGCG       >  1:532344/1‑236                                                                                                                                                                                                                                     AGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGCTCGCGGGTCTGCATGGCCAGACGCAGGGCGGTTTTGCCGAAGCGGTCGATCGACACGCCGACCAG          >  2:1467691/1‑233                                                                                                                                                                                                                                     AGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGCTCGCGGGTCTGCATGGC                                                          >  1:109705/1‑185                                                                                                                                                                                                                                       CGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGC                                                                           <  2:928066/166‑1                                                                                                                                                                                                                                        GCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGCTCGCGGGTCTGCATGGCCAGACGCAGGGCGGTTTTGCCG                                    >  1:122004/1‑204                                                                                                                                                                                                                                          CTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGcg                                                                                                                                                                   >  1:127952/1‑73                                                                                                                                                                                                                                          CTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGCTCGCGGGTCTGCATGGCCAGCCGCAGGGCGGTTTTGCCGAAGCGGTCGATCGACACGCCGACCAGGCGGCCAG  >  1:1118197/1‑236                                                                                                                                                                                                                                          CTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGCTCGCGGGTCTGCATGGCCAGACGCAGGGCGGTTTTGCCGAAGCGGTCGATCGACACGCCGACCAGGCGGCCtg  >  1:1353432/1‑234                                                                                                                                                                                                                                            TCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCC                                                                                                                                    <  2:645114/104‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCAAAACCGCCCTGCGTCTGGCCATGCAGACCCGCGAGCAGCACATCCGCCGCGAAAAGGCCACCAGCAACATCTGCACCGCCCAGGTGCTGCTGGCCAACATCGCCAGCATGTTCGCCGTGTACCACGGCCCTGCCGGTCTCAAGCGCATTGCCGAGCGCACCCACGCCCTGACCGCGATCCTCGCCGCCGGCCTGAAGGCGCTGGGCGTACAAGTGGTGGGCGCCAGCGCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1128632‑1128396 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgccttcAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCGCGGCGGATGTGCTGCTCGCGGGTCTGCATGGCCAGACGCAGGGCGGTTTTGCCGAAGCGGTCGATCGACACGCCGACCAGGCGGCCAG  >  AE015451/1128436‑1128667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.