New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1162598 =	94 (1.090)	6 (0.070)	6/340	NT	6.5%	coding (366/1344 nt)	oprB‑I	carbohydrate‑selective porin
	?	AE015451	1162699 =	82 (1.000)					coding (467/1344 nt)	oprB‑I	carbohydrate‑selective porin

TGGCTGACCGGCCAGTTGTACCAGATGCCGCCCACCCAGTTGCCCACCTGCGAGCCGCAGAAGGCCAGGTTCTGGAAGTCGCAAGGGAAGCTGTTGAAGTCCTCGCCCTCGCCAAAACGGCCAAATTTCACGTCCAGCGCGCCGTCGAAGTACTTCTGCTTGATCCACATCTGGGTCAGGCGCCAGGTCTGGCCACGGCCCCACACCTCCTGCACCGAGCTGAACTGCCCGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1162834‑1162598 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcgcTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCAAC  >  AE015451/1162699‑1162928                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGGCTGACCGGCCAGTTTTACCAGATGCCGCCCACCCAGTTGCCCACCTGCGAGCCGCAGAAGGCCAGGTTCTGGAAGTCGCAAGGGAAGCTGTTGAAGTCCTCGCCCTCGCCAAAACGGCCAAATTTCACGTCCAGCGCGCCGTCGAAGTACTTCTGCTTGATCCACATCTGGGTCAGGCGCCAGGTCTGGCCACGGCCCCACACCTCCTGCACCGAGCTGAACTGCCCGGCGCG                                                                                                                                                                                                                                         <  1:668809/236‑1                                                                                                 AAGTCCTCGCCCTCGCCAAAACGGCCAAATTTCACGTCCAGCGCGCCGTCGAAGTACTTCTGCTTGATCCACATCTGGGTCAGGCGCCAGGTCTGGCCACGGCCCCACACCTCCTGCACCGAGCTGAACTGCCCGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACT                                                                                                                                                                                                 <  2:952347/180‑1                                                                                                  AGTCCTCGCCCTCGCCAAAACGGCCAAATTTCACGTCCAGCGCGCCGTCGAAGTACTTCTGCTTGATCCACATCTGGGTCAGGCGCCAGGTCTGGCCACGGCCCCACACCTCCTGCACCGAGCTGAACTGCCCGGCGC                                                                                                                                                                                                                                          <  2:1467918/138‑1                                                                                                                                                       tatTTCTGCTTGATCCACATCTGGGTCAGGCGCCAGGTCTGGCCACGGCCCCACACCTCCTGCACCGAGCTGAACTGCCCGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGG                                                                                                                                                                                                          <  2:835943/114‑1                                                                                                                                                                      cgccTCTGGGTCAGCCGTCAGGTCTGGCCGCGGCCCCGCTCCTCCTGCACCGTGCTGAACTGCCCGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCG                                                                                                                                                  <  1:858091/154‑1                                                                                                                                                                           CTGGGTCAGGCGCCAGGTCTGGCCACGGCCCCACACCTCCTGCACCGAGCTGAACTGCCCGGCGCGCTGGACGTGAAATTTGGCCGTGTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCT                                                                                                                                                    <  1:1378719/151‑1                                                                                                                                                                                 CAGGCGCCAGGTCTGGCCACGGCCCCACACCTCCTGCACCGAGCTGAACTGCCCGGC                                                                                                                                                                                                                                            >  1:651206/1‑57                                                                                                                                                                                 CAGGCGCCAGGTCTGGCCACGGCCCCACACCTCCTGCACCGAGCTGAACTGCCCGGC                                                                                                                                                                                                                                            <  2:651204/57‑1                                                                                                                                                                                                         CCACACCTCCTGCACCGAGCTGAACTGCCCGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGGGGGCAGCTGGGTGGGCGGCATCTGGTACAACTGGCCGGGCA                                                                                                    >  2:137276/1‑169                                                                                                                                                                                                                        CGAGCTGAACTGCCCGGGGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGG                                                                                                                           <  1:146446/131‑1                                                                                                                                                                                                                                      CGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCA    >  1:1031985/1‑236                                                                                                                                                                                                                                        GCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCAAC  >  1:1418515/1‑236                                                                                                                                                                                                                                        GCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGA                                                            >  1:681617/1‑178                                                                                                                                                                                                                                           CGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGT                                                                                              >  1:1195570/1‑141                                                                                                                                                                                                                                           CGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGT                                                                                              <  2:1195567/141‑1                                                                                                                                                                                                                                            GCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAAC                                                                       >  1:883368/1‑163                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGGCTGACCGGCCAGTTGTACCAGATGCCGCCCACCCAGTTGCCCACCTGCGAGCCGCAGAAGGCCAGGTTCTGGAAGTCGCAAGGGAAGCTGTTGAAGTCCTCGCCCTCGCCAAAACGGCCAAATTTCACGTCCAGCGCGCCGTCGAAGTACTTCTGCTTGATCCACATCTGGGTCAGGCGCCAGGTCTGGCCACGGCCCCACACCTCCTGCACCGAGCTGAACTGCCCGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1162834‑1162598 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcgcTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCAAC  >  AE015451/1162699‑1162928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.