New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1296784 =	NA (NA)	21 (0.250)	16/342	NT	NA	intergenic (‑537/‑29)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA 1/transposase
	?	AE015451	1296822 =	NA (NA)					coding (10/1329 nt)	PP_1133	transposase

ACCCCCGTGGATTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1297024‑1296784 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGC  >  AE015451/1296822‑1297055                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACCCCCGTGGATTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGG                                                                                                                                                                                                                                                 <  1:1307110/236‑1   CCCCGTGGATTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCG                                                                                                                                                                                                                                               <  1:1066462/236‑1   CCCCGTGGATTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCG                                                                                                                                                                                                                                               <  1:1350953/236‑1   CCCCGTGGATTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGACAAAGGGCt                                                                                                                                                                                                                                               >  2:1032511/1‑235     CCGTGGATTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCG                                                                                                                                                                                                                                             <  1:1174348/236‑1     CCGTGGATTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCG                                                                                                                                                                                                                                               <  2:1084699/234‑1         GGATTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAATCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                >  1:25603/1‑229            TTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCT                                                                                                                                                                                                                                      <  1:97564/236‑1              CCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                <  2:1147517/224‑1               gATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCC                                                                                                                                                                                                                                   <  1:1491502/235‑1               CATGGCAACGACCTTGATCCCCAGGCTGTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCC                                                                                                                                                                                                                                   <  1:897038/236‑1                 TGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAA                                                                                                                                                                                                                                 <  1:1374989/236‑1                       CGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACG                                                                                                                                                                                                                           <  1:1311753/236‑1                           CTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTT                                                                                                                                                                                                                       <  1:775153/236‑1                                        CTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                >  1:79646/1‑198                                          TTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACTTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGC                                                                                                                                                                                                                                              <  1:1440908/198‑1                                                       GCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                >  2:1198080/1‑183                                                              TGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGTCCGCCATGAAATGCTCGCGACCACCGAGATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                <  2:1301702/176‑1                                                              TGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAA                                                                                                                                                                                                                                 <  1:1169032/191‑1                                                                AGCAGGTCGTCAGTCAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCC                                                                                                                                                                                                                                   <  1:844956/187‑1                                                                      TCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCG                                                                                                                                                                                                                                               <  1:650288/169‑1                                                                        GTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAG                                                                                                                                                                                                                                >  1:614050/1‑182                                                                        GTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAG                                                                                                                                                                                                                                <  2:614048/182‑1                                                                             TAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCG                                                                                                                                                                                                                                             <  2:898214/164‑1                                                                             TAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                >  2:1512409/1‑161                                                                              AAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCG                                                                                                                                                                                                                                               <  1:193122/161‑1                                                                                   ACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGC                                                                                                                                                                                                  <  1:645904/201‑1                                                                                          CGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGCAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGC                                                                                                                                                                                                                                            >  2:317756/1‑152                                                                                          CGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAG                                                                                                                                                                                                                                         >  1:262692/1‑155                                                                                             CTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCA                                                                                                                                                                                                                                  <  1:143611/159‑1                                                                                                GACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCG                                                                                                                                                                                                                                               <  1:153719/143‑1                                                                                                        TTTCGTGCCGGGGATCGACCGACACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGT                                                                                                                                                                                    <  2:672040/194‑1                                                                                                            GTGGCGGGGATCGACCGCCACGAAATGCTCTCGACTACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGTAAGGCTTGCGCGCCATGATCAACCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                <  1:727581/130‑1                                                                                                                  GGGATCGACCGCCCCGAAATGCTCTCGACCACCGACATCGATCGCTGCGCAATGGTGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGCTGAATCCTCACCGTACAAAGGGCG                                                                                                                                                                                                                                               >  2:733677/1‑125                                                                                                                        GACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCG                                                                                                                                                                                                                                               <  2:392040/119‑1                                                                                                                           CGCCACGAAATGCTCGCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGG                                                                                                                                                                                                                                                 <  2:123103/114‑1                                                                                                                            GCCACGAAATGCTCTCGACCACCGAGATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTT                                                                                                                                                                                                                                     <  2:525213/125‑1                                                                                                                              CACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATTATGAATCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                <  2:810316/112‑1                                                                                                                               ACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCG                                                                                                                                                                                               <  1:1347275/160‑1                                                                                                                                   aaggccCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTC                                                                                                                                                                                                              <  2:11598/135‑1                                                                                                                                   AATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAG                                                                                                                                                                                                                                <  2:724927/123‑1                                                                                                                                   AATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                <  2:496628/107‑1                                                                                                                                   AATGCTCGCGACCACCGAGATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCG                                                                                                                                                                                                                                               <  2:528995/108‑1                                                                                                                                       acCTCGACCCCCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTC                                                                                                                                                                                                                 <  2:271306/132‑1                                                                                                                                         CTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCG                                                                                                                                                                                                                                             <  2:52827/104‑1                                                                                                                                            GACCACCGAGATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCG                                                                                                                                                                                                                                             <  2:843994/101‑1                                                                                                                                            GACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC                                                                                                                                                                                                                                                <  2:651339/98‑1                                                                                                                                            GACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGG                                                                                                                                                                                                                                                 <  2:1340842/97‑1                                                                                                                                                   GACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGCAAGGCTTGCCCGCCATGATTAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATT                                                                                                                                                                                                    <  2:631686/135‑1                                                                                                                                                    ACATCGATCGCCGCGCAATCGGGATGGACAACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAGTCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAG                                                                                                                                                                                                                                <  1:122522/106‑1                                                                                                                                                               CGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGC                                                                                                                                                                                                                                        <  1:1034521/87‑1                                                                                                                                                               CGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGC                                                                                                                                                                                                                                        >  2:1034518/1‑87                                                                                                                                                                      TCGGGATGGCCGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCG                                                                                                                                                                           <  2:535213/141‑1                                                                                                                                                                                                                                              GCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGGTCCCCG                                                                                                                                                >  2:372766/1‑96                                                                                                                                                                                                                                              GCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGAC                                                                                                        <  1:616471/136‑1                                                                                                                                                                                                                                               CGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAG   >  1:992329/1‑236                                                                                                                                                                                                                                               CGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAG   >  1:1122443/1‑236                                                                                                                                                                                                                                               CGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGA                                             >  2:563402/1‑194                                                                                                                                                                                                                                               CGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAG                                                                                            >  2:17087/1‑147                                                                                                                                                                                                                                               CGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTC                                                                                               <  2:913197/144‑1                                                                                                                                                                                                                                               CGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGACAGCACTTCGTG                                                                                                                                                              >  2:910178/1‑81                                                                                                                                                                                                                                                GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCTGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGG                                                                  >  1:1035846/1‑172                                                                                                                                                                                                                                                GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGC  >  1:992780/1‑236                                                                                                                                                                                                                                                GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGAT         >  1:1014768/1‑229                                                                                                                                                                                                                                                GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGC                                                                       <  2:247162/167‑1                                                                                                                                                                                                                                                GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGG                                                                                                                                                                              <  2:1235214/64‑1                                                                                                                                                                                                                                                GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATCTCGGTGGTCGAGGGCATTTTGTAAAGGAAGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAAC                                                                                   >  2:820189/1‑155                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACCCCCGTGGATTCCATGGCAACGACCTTGATCCCCAGGCTTTCAAGCCAGTTAGCCATCTTGAGCAGGTCGTCAGTAAAGGACGTGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1297024‑1296784 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGC  >  AE015451/1296822‑1297055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.