New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1483865 =	98 (1.140)	6 (0.070)	5/334	NT	6.4%	intergenic (+10/‑58)	yhdW/yhdX	putative amino‑acid ABC transporter‑binding protein YhdW/putative amino acid ABC transporter ‑ permease subunit
	?	AE015451	1483892 =	84 (1.040)					intergenic (+37/‑31)	yhdW/yhdX	putative amino‑acid ABC transporter‑binding protein YhdW/putative amino acid ABC transporter ‑ permease subunit

CTGCGGTCGAGGAAGTCGAAGCCCGAGGTGATGCCCCGGTGTTGCAGGTTGGTTTGCGTGTTGTGGAACAGGTACCAGCCCAGGCCGACCACGAAGACGATCGTGAGGATCTGGAACAGCCACGCGCGCACACGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1484104‑1483865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccgcaggCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTGTTCCACAACACGCAAACCAACCTGCAACACCGGGGCATCACCTCGGGCTTCGACTTCCTCGACCGCAGTGCCGGCTTCGGTATCGCCCAG  >  AE015451/1483892‑1484126                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGCGGTCGAGGAAGTCGAAGCCCGAGGTGATGCCCCGGTGTTGCAGGTTGGTTTGCGTGTTGTGGAACAGGTACCAGCCCAGGCCGACCACGAAGACGATCGTGAGGATCTGGAACAGCCACGCGCGCACACGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCC                                                                                                                                                                                                                                                  <  1:971446/235‑1            GAAGTCGAAGCCCGAGGTGATGCCCCGGTGTTGCAGGTTGGTTTGCGTGTTGTGGAACAGGTACCAGCCCAGGCCGACCACGAAGACGATCGTGAGGATCTGGAACAGCCACGCGCGCACACGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCCGCAGGCTGTTCG                                                                                                                                                                                                                                      <  1:1310341/236‑1            GAAGTCGAAGCCCGAGGTGATGCCCCGGTGTTGCAGGTTGGTTTGCGTGTTGTGGAACAGGTACCAGCCCAGGCCGACCACGAAGACGATCGTGAGGATCTGGAACAGCCACGCGCGCACACGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCG                                                                                                                                                                                                                                                    <  2:910885/222‑1                                                                  GAACAGGTACCAGCCCAGGCCGACCACGAAGACGATCGTGAGGATCTGGAACAGCCACGCGCGCACACGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCCGCAGGCTGTTCGAATCCCT                                                                                                                                                                                                                               <  2:1417796/189‑1                                                                   AACAGGTACCAGCCCAGGCCGACCACGAAGACGATCGTGAGGATCTGGAACAGCCACGCGCGCACACGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCCGCAGGCTGTTCG                                                                                                                                                                                                                                      <  2:966230/181‑1                                                                                     CCGACCACGAAGACGATCGTGAGGATCTGGAACAGCCACGCGCGCACACGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGC                                                                                                                                                                                                                                                   >  2:1120658/1‑150                                                                                                                          ACGCGCGCACACGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCCGC                                                                                                                                                                                                                                                >  1:468940/1‑116                                                                                                                                     CGCGGATCGTTAAGGGACCAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCA                                                                                                                                                                                                   <  2:1098703/150‑1                                                                                                                                     CGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGC                                                                                                                                                                                                                                                   >  2:352907/1‑102                                                                                                                                             GTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCCGCAGGCTGTTCGACTCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGC                                                                                                                                                                                <  2:991708/161‑1                                                                                                                                                          CCCTTGGGAGCGCCGATTTGATTTGGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCG                                                                                                                                                  <  1:1476815/178‑1                                                                                                                                                                                                                                        CGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTGTTCCACAACACGCAAACCAACCTGCAACACCGGGGCATCACCTCGGGCTTCGACTTCCTCGACCGCAGTGCCGGCTTCGGTA          >  1:1276379/1‑236                                                                                                                                                                                                                                         GCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGG                                                                                                       <  2:1122066/142‑1                                                                                                                                                                                                                                           CGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTGTTCCACAACACGCAAACCAACCTGCAACACCGGGGCATCACCTCGGGCTTCGACTTCCTCGACCGCAGTGCCGGCTTCGGTATCG       <  1:1421349/236‑1                                                                                                                                                                                                                                              AGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTGTTCCACAACACGCAAACCAACCTGCAACACCGGGGCATCACCTCGGGCTTCGACTTCCTCGACCGCAGTGCCGGCTTCGGTATCGCCC    <  1:236480/236‑1                                                                                                                                                                                                                                               GGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTGTTCCACAACACGCAAACCAACCTGCAACACCGGGGCATCACCTCGGGCTTCGACTTCCTCGACCGCAGTGCCGGCTTCGGTATCGCCC    <  1:1468702/235‑1                                                                                                                                                                                                                                               GGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTGTTCCACAACACGCAAACCAACCTGCAACACCGGGGCATCACCTCGGGCTTCGACTTCCTCGACCGCAGTGCCGGCTTCGGTATCGCCC    <  1:115794/235‑1                                                                                                                                                                                                                                               GGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTG                                                                                            <  1:525415/147‑1                                                                                                                                                                                                                                               GGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTG                                                                                            >  2:525413/1‑147                                                                                                                                                                                                                                                GCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTGTTCCACAACACGCAAACCAACCTGCAACACCGGGGCATCACCTCGGGCTTCGACTTCCTCGACCGCAGTGCCGGCTTCGGTATCGCCCAG  <  1:1231217/236‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGCGGTCGAGGAAGTCGAAGCCCGAGGTGATGCCCCGGTGTTGCAGGTTGGTTTGCGTGTTGTGGAACAGGTACCAGCCCAGGCCGACCACGAAGACGATCGTGAGGATCTGGAACAGCCACGCGCGCACACGCGGATCGTTAAGGGACAAGCCCTTGGGTGCGCCGATTTGATTTTGCATGAAGTGCCCCGGACAGTAGGGATTCGAACAGCCTGCGGCGGCGGGATGCCGCCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1484104‑1483865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccgcaggCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGGGCTGGTACCTGTTCCACAACACGCAAACCAACCTGCAACACCGGGGCATCACCTCGGGCTTCGACTTCCTCGACCGCAGTGCCGGCTTCGGTATCGCCCAG  >  AE015451/1483892‑1484126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.