| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 2066297 | 86 (1.000) | 4 (0.050) | 4/304 | NT | 5.2% | intergenic (+36/+5) | PP_1842/PP_1843 | Glutamine amidotransferase, class I/Mg2+/Co2+ transporter |
| ? | AE015451 | = 2066271 | 73 (0.990) | intergenic (+10/+31) | PP_1842/PP_1843 | Glutamine amidotransferase, class I/Mg2+/Co2+ transporter | |||||
ATTCGCGACCAGGTGCTGTGCTTCCAGGGCCACCCGGAATTCGTGCATGACTACTCCCGCGCACTGCTCGACGCGCGCCAGGAATACCTGGGTGACGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCCGCGAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2066049‑2066297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttcgcgggcgcgcccgcgaagggTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGTGGCCAGGCTGGCGACGGCCTTGTGGTACACCTCGTCACCCAGGTATTCCTGGCGCGCGTCGAGCAGTGCGCGGGAGTAGTCATGCACGAATTCCGGGTGGCCCTGGAAGCACAGCACCTGGTCGCGAAT < AE015451/2066271‑2066049 ATTCGCGACCAGGTGCTGTGCTTCCAGGGCCACCCGGAATTCGTGCATGACTACTCCCGCGCACTGCTCGACGCGCGCCAGGAATACCTGGGTGACGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGC < 1:1020514/235‑1 GCGACCAGGTGCTGTGCTTCCAGGGCCACCCGGAATTCGTGCATGACTACTCCCGCGCACTGCTCGACGCGCGCCAGGAATACCTGGGTGACGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGC < 2:928247/233‑1 ACCCGGAATTCGTGCATGACTACTCCCGCGCACTGCTCGACGCGCGCCAGGAATACCTGGGTGACGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCC < 2:950068/195‑1 ACCCGGAATTCGTGCATGACTACTCCCGCGCACTGCTCGACGCGCGCCAGGAATACCTGGGTGACGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCC > 1:950070/1‑195 TCGTGCATGACTACTCCCGCGCACTGCTCGACGCGCGCCAGGAATACCTGGGTGACGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGC > 1:29022/1‑197 CTACTCCCGCGCACTGCTCGACGCGCGCCAGGAATACCTGGGTGACGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGTCGACAGCGCCGCGTAATCGGTGGCAACC > 1:549988/1‑175 AGGAATACCTGGGTGACGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCCGC > 1:201299/1‑164 CGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCCGC > 2:1461517/1‑148 CACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGC < 2:1195113/132‑1 CGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCCGCGAAG > 2:529080/1‑134 gaACCAGGGTGATTTGGTAGGGGGGTGGATGTGGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCC < 1:880443/105‑1 CCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCCGCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGA < 2:1308360/149‑1 TGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCCGCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGGGGCCAGGCTGGCGACGGCC > 1:52259/1‑199 CGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCCGCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCT > 1:1160431/1‑171 CTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTCGCAACCCTTCGCcg > 2:703143/1‑61 AAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCCGCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGTGGCCAGGCTGGCGACGGCCTTGTGGTACACCTCGTCACCCAGGTATTCCTG > 2:1274793/1‑206 CTTCGCGGGCGCGCCCGCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGTGGt > 2:870999/1‑120 TTCGCGGGCGCGCCCGCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGTGGCCAGGCTGGCGACGGCCTTGTGGTACACCTCGTCACCCAGGTATTCCTGGCGCGCGTCGAGCAGTGCGCGGGA > 2:937542/1‑192 GCGGGCGCGCCCGCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGTGGCCAGGCTGGCGACGGCCTTGTGGTACACCTCGTCACCC < 1:1352826/154‑1 GCGGGCGCGCCCGCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGTGGCCAGGCTGGCGACGGCCTTGTGGTACACCTCG > 1:1461520/1‑148 GCCCGCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGTGGCCAGGCTGGCGACGGCCTTGTGGTACACCTCGTCACCCAGGTATTCCTGGCGCGCGTCGAGCAGTGCGCGGGAGTAGTCATGCACGAATTCCGGGTGGCCCTGGAAGCACAGCACCTGGTCGCGAAT > 1:1188488/1‑235 GCGAAGGGTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGTGGCCAGGCTGGCGACGGCCTTGTGGTACACCTCGTCACCCAGGTATTCCTGGCGCGCGTCGAGCAGTGCGCGGGAGTCGTCATGCACGAACTCCGGGc > 2:205943/1‑199 ATTCGCGACCAGGTGCTGTGCTTCCAGGGCCACCCGGAATTCGTGCATGACTACTCCCGCGCACTGCTCGACGCGCGCCAGGAATACCTGGGTGACGAGGTGTACCACAAGGCCGTCGCCAGCCTGGCCACCGAGCACCAGGGTGATTTGGTAGGGGAGTGGATGTTGCGCTTTATCCAGCAGCCGTCAAAGGCCGGCGACAGCGCCGCGTAATCGGTGGCAACCCTTCGCGGGCGCGCCCGCGAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2066049‑2066297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttcgcgggcgcgcccgcgaagggTTGCCACCGATTACGCGGCGCTGTCGCCGGCCTTTGACGGCTGCTGGATAAAGCGCAACATCCACTCCCCTACCAAATCACCCTGGTGCTCGGTGGCCAGGCTGGCGACGGCCTTGTGGTACACCTCGTCACCCAGGTATTCCTGGCGCGCGTCGAGCAGTGCGCGGGAGTAGTCATGCACGAATTCCGGGTGGCCCTGGAAGCACAGCACCTGGTCGCGAAT < AE015451/2066271‑2066049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |