New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 208742153 (0.620)13 (0.200) 11/272 NT 20.9% intergenic (+234/+684) PP_1865/aroH transposase/Phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
?AE015451 2088057 = 58 (0.880)intergenic (+870/+48) PP_1865/aroH transposase/Phospho‑2‑dehydro‑3‑deoxyheptonate aldolase

CAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2087169‑2087421
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcaatgcctccactcggcctcctgaagtcgcaatctgcgtTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATAT  >  AE015451/2088057‑2088277
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
CAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTC                                                                                                                                                                                                                                                                        <  2:980576/212‑1
             CCTTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCT                                                                                                                                                                                                                                   <  1:535350/236‑1
             CCTTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATC                                                                                                                                                                                                                                    <  1:1091064/235‑1
              CTTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCACAAAGGAACCAAAAACCGGCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATC                                                                                                                                                                                                                                    <  1:310230/234‑1
              CTTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCT                                                                                                                                                                                                                                   <  1:1438035/235‑1
                 GAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGT                                                                                                                                                                                                                               <  1:1320986/236‑1
                   AAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGC                                                                                                                                                                                                                                 <  2:593038/232‑1
                              CTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGT                                                                                                                                                                                                                               <  1:1247913/223‑1
                                            CTTGTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCT                                                                                                                                                                                                                          <  1:675391/214‑1
                                                TTGTCGTGGCAAACAGGAACCAAACACCGTCGGCCCCCAGCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTC                                                                                                                                                                                                                                                        <  2:360920/180‑1
                                                   TCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACC                                                                                                                                                                                                                  <  2:773725/215‑1
                                                      gtggccAAAGTAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGC                                                                                                                                                                                                                                 <  1:717380/191‑1
                                                            AAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTC                                                                                                                                                                                                                                                        <  2:875561/168‑1
                                                                     AAAAACCGTCGACTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGCTACCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCCCTGCAGCCCCCATCCATGGTCCCTCAGCGCTCGACCGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCT                                                                                                                                                                                                                                                   >  1:1191534/1‑164
                                                                      AAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTC                                                                                                                                                                                                                                                                        <  1:411818/142‑1
                                                                      AAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTC                                                                                                                                                                                                                                                                        <  2:1116323/142‑1
                                                                      AAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTC                                                                                                                                                                                                                                                                        >  1:1116326/1‑142
                                                                      AAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTC                                                                                                                                                                                                                                                                        >  2:411816/1‑142
                                                                           CGTCCGCTCCCATCCTCCCGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTA                                                                                                                                                                                                                    <  1:265693/189‑1
                                                                                 CTCCCATCATCCGGCCCCGACGCTGCGCTCCGGGGTCCCCGCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATC                                                                                                                                                                                                                                    <  2:59004/167‑1
                                                                                                            CTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGC                                                                                                                                     >  1:1448799/1‑235
                                                                                                             TCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCc                                                                                                                                                                                                                                                                    >  2:167639/1‑106
                                                                                                              CCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCC                                                                                                                                    >  2:761269/1‑234
                                                                                                                  GGTCCCCTCGCTCCGGCCTTGCTTCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACT                                                                                                                                >  2:1398293/1‑234
                                                                                                                               CGGCCGTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGC                                                                                                                                                                                 <  2:477221/172‑1
                                                                                                                                 GCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCAAGATCAAAAGCGAAAAGCGCTT                                                                                                                                                                             >  2:1286944/1‑174
                                                                                                                                     TGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCT                                                                                                                                                                                                                                   >  2:178539/1‑117
                                                                                                                                     TGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCT                                                                                                                                                                                                                                   <  1:178540/117‑1
                                                                                                                                                GCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATC                                                                                                 <  1:1398296/235‑1
                                                                                                                                                 CACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGG                                                                                                                                                        <  1:144538/179‑1
                                                                                                                                                            AGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGC                                                                                                                                                                                                                                 >  1:610563/1‑96
                                                                                                                                                            AGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGC                                                                                                                                                                                                                                 <  2:610561/96‑1
                                                                                                                                                                      CATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCG                                                                                                     <  2:544933/210‑1
                                                                                                                                                                                 AGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACT                                                                                                                                                                                                                                                         <  2:769180/51‑1
                                                                                                                                                                                 AGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACT                                                                                                                                                                                                                                                         >  1:769182/1‑51
                                                                                                                                                                                  GCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACC                                                                                                                                                                                                                  <  2:1458506/89‑1
                                                                                                                                                                                                   ATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAA                                                                                                                                                                                                                                             >  2:1509450/1‑45
                                                                                                                                                                                                       CCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTT                                                                                                                                                                                                                              >  2:718109/1‑56
                                                                                                                                                                                                       CCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAAC                                                                                                                                                                                                                      >  2:778793/1‑64
                                                                                                                                                                                                              CTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGC                                   <  1:1046773/236‑1
                                                                                                                                                                                                                    CCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAACGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCACGGATCACAATGGGTGTGATACCGGTCAGACAACGCAT                                                                 <  2:1403355/200‑1
                                                                                                                                                                                                                    CCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGT                                                                                      <  1:1286947/179‑1
                                                                                                                                                                                                                    CCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATC                                                                                                                                             <  2:1135249/124‑1
                                                                                                                                                                                                                    CCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCG                                                                                                                                                                                                                 <  1:718111/56‑1
                                                                                                                                                                                                                     CGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCG                              >  2:1375163/1‑234
                                                                                                                                                                                                                     CGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATC                                                                                                                                             <  1:348334/123‑1
                                                                                                                                                                                                                      GCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGAT                                                       <  1:225215/208‑1
                                                                                                                                                                                                                       CAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCGTCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGT                            >  2:1411205/1‑234
                                                                                                                                                                                                                       CAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAG                                                                          >  2:1060430/1‑188
                                                                                                                                                                                                                        AATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTCCCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGAC                         <  1:206270/236‑1
                                                                                                                                                                                                                           ccctgcgCTCGGCCTCCTGAAGTCGCAATCTGCATCGCCTGAACTACCGCGCGCTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCG                                                                                                     <  1:405209/150‑1
                                                                                                                                                                                                                           GCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGAC                         <  2:1285900/233‑1
                                                                                                                                                                                                                             CTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTT                      <  2:159314/234‑1
                                                                                                                                                                                                                              tgcgCTCGGCCTCCTGAAGTCGCAATCTGCATCGCCTGAACTACCGCGCGCTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACG                                                                                                                                      <  1:832600/117‑1
                                                                                                                                                                                                                              tgcgCTCGGCCTCCTGAAGTCGCAATCTGCATCGCCTGAACTACCGCGCGCTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACG                                                                                                                                      >  2:832598/5‑121
                                                                                                                                                                                                                              TCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGAC                         <  1:472306/230‑1
                                                                                                                                                                                                                              TCCACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGC                                   <  1:861718/220‑1
                                                                                                                                                                                                                                CACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCA                                             >  1:364921/1‑208
                                                                                                                                                                                                                                 ACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCC                <  1:1443831/236‑1
                                                                                                                                                                                                                                 ACTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCC                <  1:1027581/236‑1
                                                                                                                                                                                                                                  CTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACC                                        >  2:682452/1‑211
                                                                                                                                                                                                                                  CTCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACC                                        <  1:682454/211‑1
                                                                                                                                                                                                                                   TCGGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAG              >  1:1019258/1‑236
                                                                                                                                                                                                                                     GGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTC            <  1:880378/236‑1
                                                                                                                                                                                                                                     GGCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTC            <  1:246926/236‑1
                                                                                                                                                                                                                                      GCCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCC                                                  <  2:1045322/197‑1
                                                                                                                                                                                                                                       CCTCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTCAT          <  1:683472/236‑1
                                                                                                                                                                                                                                         TCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTCATCT        >  1:1493151/1‑236
                                                                                                                                                                                                                                         TCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTCATCT        >  1:125184/1‑236
                                                                                                                                                                                                                                         TCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTCATC         >  1:609168/1‑235
                                                                                                                                                                                                                                         TCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAG              >  1:434092/1‑230
                                                                                                                                                                                                                                         TCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCATCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGA                          >  2:1046547/1‑218
                                                                                                                                                                                                                                         TCCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAG                                                                                                                                                                           >  2:1079303/1‑73
                                                                                                                                                                                                                                         TCCTGAAGTCGCAATCTGCATTGCCTGAACTAGCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCACTTAG                                                                                                                                                                           >  2:1433532/1‑73
                                                                                                                                                                                                                                          CCTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTA                                                                                                                                                                            <  1:227865/71‑1
                                                                                                                                                                                                                                          CCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTA                                                                                                                                                                            >  2:227864/1‑71
                                                                                                                                                                                                                                           CTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCC                <  1:592501/226‑1
                                                                                                                                                                                                                                           CTGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGC                                                                                                                                                                                 <  2:1050654/65‑1
                                                                                                                                                                                                                                            TGAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGT             <  1:472917/228‑1
                                                                                                                                                                                                                                             GAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGAT    >  1:1278890/1‑236
                                                                                                                                                                                                                                             GAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCG                                                                                                     <  1:739860/139‑1
                                                                                                                                                                                                                                             GAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCG                                                                                                     >  2:739858/1‑139
                                                                                                                                                                                                                                             GAAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCG                                                                                                                                                   <  1:788726/93‑1
                                                                                                                                                                                                                                             GAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCG                                                                                                                                                   >  2:788724/1‑93
                                                                                                                                                                                                                                              AAGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATA   >  2:1039415/1‑236
                                                                                                                                                                                                                                               AGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATAT  >  1:165294/1‑236
                                                                                                                                                                                                                                               AGTCGCAATCTGCGTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTC            <  1:1389687/226‑1
                                                                                                                                                                                                                                                      ATCTGCGTTGCCTGAACTACCTCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGACCGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATC                                                      <  2:370265/177‑1
                                                                                                                                                                                                                                                            GTTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGT                                                          <  1:1343533/167‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
CAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2087169‑2087421
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcaatgcctccactcggcctcctgaagtcgcaatctgcgtTGCCTGAACTACCGCGCACTTAGAAGCACGATCAAAAGCGAAAAGCGCTTAGCGCCGTACCTGCTTGAGGGTTTCGGCAATCAGGAACGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCACCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATAT  >  AE015451/2088057‑2088277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.