New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2299164	69 (0.800)	5 (0.060)	5/336	NT	8.8%	coding (958/3645 nt)	sbcC	Exonuclease SbcC
	?	AE015451	= 2299350	39 (0.480)					coding (772/3645 nt)	sbcC	Exonuclease SbcC

CTGCTGTTGCGCCTGCTGGCTGATGCTGCGCTGGGCGGCCAGCTCCTGGTCCAGGCGTGCCAGCGTATCCTGAGCGGCAAAGGCCTGGCGCAGGCGCGGCGCATTCTCGCCGTGCTCGGCCTGGCGGTCGGCAAGCGCTTGGCGCGCAGTGTCCAGCGCCTGTTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAATTTTCGCGGCCACTGGCGCCAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2298922‑2299164 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagctgGAGCAGCAACGCAACTGGCTGAATGAACAACGCCAGCTTCAGGCCCAACACACCGAAGCCAGCACCACGCTGCAGGCCGCCGAACTGGACTGGCAACAGCTGGCCGAACCACGCCTGGACCTGGCACGCCTGGAGCGCCTGGCCCCACAGCGTCACCAGTTCCACCGCCGACAGGCCCTGAGCGCACA  <  AE015451/2299350‑2299163                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGCTGTTGCGCCTGCTGGCTGATGCTGCGCTGGGCGGCCAGCTCCTGGTCCAGGCGTGCCAGCGTATCCTGAGCGGCAAAGGCCTGGCGCAGGCGCGGCGCATTCTCGCCGTGCTCGGCCTGGCGGTCGGCAAGCGCTTGGCGCGCAGTGTCCAGCGCCTGTTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAATTTTCGCGGCCACTGG                                                                                                                                                                                                       <  1:356291/234‑1                                TGGGCGGCCAGCTCCTGGTCCAGGCGTGCCAGCGTATCCTGAGCGGCAAAGGCCTGGCGCAGGCGCGGCGCATTCTCGCCGTGCTCGGCCTGGCGGTCGGCAAGCGCTTGGCGCGCAGTGTCCAGCGCCTGTTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAATTTTCGCGGCCCCTGGCGCC                                                                                                                                                                                                   >  2:872143/1‑207                                 GGGCGGCCAGCTCCTGGTCCAGGCGTGCCAGCGTATCCTGAGCGGCAAAGGCCTGGCGCAGGCGCGGCGCATTCTCGCCGTGCTCGGCCTGGCGGTCGGCAAGCGCTTGGCGCGCAGTGTCCAGCGCCTGTTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAATTTTCGCGGCCACTGGCGCC                                                                                                                                                                                                   <  1:1197534/206‑1                                                    CAGGCGTGCCAGCGTATCCTGAGCGGCAAAGGCCTGGCGCAGGCGCGGCGCATTCTCGCCGTGCTCGGCCTGGCGGTCGGCAAGCGCTTGGCGCGCAGTGTCCAGCGCCTGTTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAATTTTCGCGGCCACTGGCGCCAGC                                                                                                                                                                                                <  2:538474/190‑1                                                                                    CCTGGCGCAGGCGCGGCGCATTCTCGCCGTGCTCGGCCTGGCGGTCGGCAAGCGCTTGGCGCGCAGTGTCCAGCGCCTGTTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAGTTTTCGCGGCCACTGGCGCCAGCTGGAGCAGCAACGCAACTGGCTGAATGAACAACGCCAGCTTCAGGCCCAACACACCGAAGCCA                                                                                                                                 <  1:704724/221‑1                                                                                                                      GGCCTGGCGGTCGGCAAGCGCTTGGCGCGCAGTGTCCAGCGCCTGTTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAATTTTCGCGGCCACTGGCGCCAGCTGGAGCAGCAACGCAACTGGCTGAATGAACAACGCCAGCTTCAGGCCCAACACACCGAAGCCAGCACCACGCTGCAGGCCGCCGAACTGGACTGGCAACAGCT                                                                                         <  1:1215165/227‑1                                                                                                                                                                   TTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAATTTTCGCGGCCACTGGCGCCAGCTGGAGCAGCAACGCAACTGGCTGAATGAACAACGCCAGCTTCAGGCCCAACACACCGAAGCCAGC                                                                                                                               <  1:441666/144‑1                                                                                                                                                                   TTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAATTTTCGCGGCCACTGGCGCCAGCTGGAGCAGCAACGCAACTGGCTGAATGAACAACGCCAGCTTCAGGCCCAACACACCGAAGCCAGC                                                                                                                               >  2:441664/1‑144                                                                                                                                                                                                           TGTTGCTGTTCGGCAATTTTCGCGGCCACTGGCGCCAGCTGGAGCAGCAACGCAACTGGCTGAATGAACAACGCCAGCTTCAGGCCCAACACACCGAAGCCAGCACCACGCTGCA                                                                                                                    >  1:801120/1‑115                                                                                                                                                                                                                                               AGCTGGAGCAGCAACGCAACTGGCTGAATGAACAACGCCAGCTTCAGGCCCAACACACCGAAGCCAGCACCACGCTGCAGGCCGCCGAACTGGACTGGCAACAGCTGGCCGAACCACGCCTGGACCTGGCACGCCTGGAGCGCCTGGCCCCACAGCGTCACCAGTTCCACCGCCGACAGGCCCTGAGCGCACA  >  2:1071663/1‑193                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGCTGTTGCGCCTGCTGGCTGATGCTGCGCTGGGCGGCCAGCTCCTGGTCCAGGCGTGCCAGCGTATCCTGAGCGGCAAAGGCCTGGCGCAGGCGCGGCGCATTCTCGCCGTGCTCGGCCTGGCGGTCGGCAAGCGCTTGGCGCGCAGTGTCCAGCGCCTGTTCGAGTTCGCGGGTGCGCACCTGCAGTTCGGCTTGCTGCTGTTGCTGTTCGGCAATTTTCGCGGCCACTGGCGCCAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2298922‑2299164 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagctgGAGCAGCAACGCAACTGGCTGAATGAACAACGCCAGCTTCAGGCCCAACACACCGAAGCCAGCACCACGCTGCAGGCCGCCGAACTGGACTGGCAACAGCTGGCCGAACCACGCCTGGACCTGGCACGCCTGGAGCGCCTGGCCCCACAGCGTCACCAGTTCCACCGCCGACAGGCCCTGAGCGCACA  <  AE015451/2299350‑2299163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.