| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2459643 = | 77 (0.900) | 6 (0.070) | 5/342 | NT | 7.3% | coding (650/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase |
| ? | AE015451 | 2459665 = | 79 (0.960) | coding (628/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase | |||||
GAACTGGTGCCAGACGTGAAGCGCGGGCTGGTGGCCGAATACGCCTGGCTCGACCCGCTGAAGGTGGCACAAAACTATGGCTGCGAACTGCTGGCATTGAACTGGACGCTGTGCACCCCCGAGCGCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCGCCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2459842‑2459643‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggctCGTTGACCGTCCACACCGACACATGCAAACCCTGGCCCTGTGCTTTGAGCAGGCGCTCGGGGGTGCACAGCGTCCAGTTCAATGCCAGCAGTTCGCAGCCATAGTTTTGTGCCACCTTCAGCGGGTCGAGCCAGGCGTATTCGGCCACCAGCCCGCGCTTCACGTCTGGCACCAGTTCCAGGGCGGCGCCCAGTACTTCGCGTGAACTGGAGGTGATGGTCACCTTGTCCA > AE015451/2459665‑2459895 GAACTGGTGCCAGACGTGAAGCGCGGGCTGGTGGCCGAATACGCCTGGCTCGACCCGCTGAAGGTGGCACAAAACTATGGCTGCGAACTGCTGGCATTGAACTGGACGCTGTGCACCCCCGAGCGCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCGCCGGCT < 1:649051/200‑1 CCAGACGTGAAGCGCGGGCTGGTGGCCGAATACGCCTGGCTCGACCCGCTGAAGGTGGCACAAAACTATGGCTGCGAACTGCTGGCATTGAACTGGACGCTGTGCACCCCCGAGCGCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCGCCGG > 2:1003325/1‑189 CGGGCTGGTGGCCGAATACGCCTGGCTCGACCCGCTGCAGGTGGCACAAAACTATGGCGGCGAACTGCTGGCATTGAACTGGACGCTGTGCACCCCCGAGCGCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGGGGACGGTCAACGAGCCGGCACTGATGCGCCGGCTCGTTGACCGTCCACAC < 1:61738/193‑1 GCTGGTGGCCGAATACGCCTGGCTCGACCCGCTGAAGGTGGCACAAAACTATGGCTGCGAACTGCTGGCATTGAACTGGACGCTGTGCACCCCCGAGCGCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCGCCGGCT < 1:388396/174‑1 GCTGGTGGCCGAATACGCCTGGCTCGACCCGCTGAAGGTGGCACAAAACTATGGCTGCGAACTGCTGGCATTGAACTGGACGCTGTGCACCCCCGAGCGCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCGCCGGCT > 2:388394/1‑174 GCTGGTGGCCGAATACGCCTGGCTCGACCCGCTGAAGGTGGCACAAAACTATGGCTGCGAACTGCTGGCATTGAACTGGACGCTGTGCACCCCCGAGCGCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCCCCGGCT > 2:78506/1‑174 TATGGCTGCGAACTGCTGGCATTGAACTGGACGCTGTGCACCCCCGAGCGCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCGCCGGCTCGTTGACCGTCC < 1:1234217/137‑1 gGCACCCCCGAGCGCCTGCTCAAAGCCCAGGGCCAGGGTTGGCATGTGTCGGTGGGGACGGTCAACGAGCCGGCACTGATGCGCCGGCTCGTTGACCGTCCACACCGACACATGCAAACC < 2:334773/119‑1 GCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACTAGCCAACACTGATGAGCCGcc > 2:998324/1‑73 GCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCGCCGGCTCGTTGACCGTCCACACCGACACATGCAAACCCTGGCCCTGTGCTTTGAGCAGGCGCTCGGGGGTGCACAGCGTCCAGTTCAATGCCAGCAGTTCGCAGCCATAGTTTTGTGCCACCTTCAGCGGGTCGAGCCAGGCGTATTCGGCCACCAGCCCGCGCTTCACG > 2:646038/1‑222 tTGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCGCCGGCTCGTTGACCGTCCACACCGACACATGCAAACCCTGG < 1:278419/80‑1 cagccAGCCGGCACTGATGCGCCGGCTCGTTGACCGTCCACACCGACACATGCAAACCCTGGCCCTGTGCTTTGAGCAGGCGCTCGGGGGTGCACAGCGTCCAGTTCAATGCCAGCAGTTCGCAGCCATAGTTTTGTGCCACCTTCAGCGGGTCGAGCCAGGCGTATTCGGCCACCCGCCCGCGCTTCcc > 2:661503/6‑188 aGCCGGCTCGTTGCCCGTCCACACCGACACATGCAAACCCTGGCCCTGTGCTTTGAGCAGGCGCTCGGGGGTGCACAGCGTCCAGTTCAATGCCAGCAGTTCGCAGCCATAGTTTTGTGCCACCTTCAGCGGGTCGAGCCAGGCGTATTCGGCCACCAGCCCGCGCTTCACGTCTGGCACCAGTTCCAGGGCGGCGCCCAGTACTTC < 1:322791/206‑1 CGGCTCGTTGACCGTCCACCCCGACACATGCAAACCCTGGCCCTGTGCTTTGAGCAGGCGCTCGGGGGTGCACAGCGTCCAGTTCAATGCCAGCAGTTCGCAGCCATAGTTTTGTGCCACCTTCAGCGGGTCGAGTCAGGCGTATTCGGCCGCCAGCCCGCGCTTCACGTCTGGCACCAGTTCCAGGGCGGCGCCCAGTACTTCGCGTGAACTGGAGGTGATGGTCACCTTGTCCA < 1:300971/236‑1 CGGCTCGTTGACCGTCCACACCGACACATGCAAACCCTGGCCCTGTGCTTTGAGCAGGCGCTCGGGGGTGCACAGCGTCCAGTTCAATGCCAGCAGTTCGCAGCCATAGTTTTGTGCCACCTTCAGCGGGTC < 2:830628/132‑1 CGGCGCGTTGACCGTCCACACCGCCACATGCAAACCCTGGCCCTGTGCTTTGAGCAGGCGCTCGGGGGTGCACAGCGTCCAGTTCAATGCCAGCAGTTCGCAGCCATAGTTTTGTGCCACCTTCAGCGGGTCGAGCCAGGCGTATTCGGCCACCAGCCCGCGCTTCACGTCTGGCACCAGTTCCAGGGCGGCGCCCAGTACTTCGCGTGAACTG < 1:313025/214‑1 GAACTGGTGCCAGACGTGAAGCGCGGGCTGGTGGCCGAATACGCCTGGCTCGACCCGCTGAAGGTGGCACAAAACTATGGCTGCGAACTGCTGGCATTGAACTGGACGCTGTGCACCCCCGAGCGCCTGCTCAAAGCACAGGGCCAGGGTTTGCATGTGTCGGTGTGGACGGTCAACGAGCCGGCACTGATGCGCCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2459842‑2459643‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggctCGTTGACCGTCCACACCGACACATGCAAACCCTGGCCCTGTGCTTTGAGCAGGCGCTCGGGGGTGCACAGCGTCCAGTTCAATGCCAGCAGTTCGCAGCCATAGTTTTGTGCCACCTTCAGCGGGTCGAGCCAGGCGTATTCGGCCACCAGCCCGCGCTTCACGTCTGGCACCAGTTCCAGGGCGGCGCCCAGTACTTCGCGTGAACTGGAGGTGATGGTCACCTTGTCCA > AE015451/2459665‑2459895 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |