New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 2641297 = | 80 (0.930) | 8 (0.100) | 8/320 | NT | 10.3% | coding (284/798 nt) | tatD | Mg‑dependent cytoplasmic DNase / RNase |
? | AE015451 | 2641315 = | 67 (0.870) | coding (266/798 nt) | tatD | Mg‑dependent cytoplasmic DNase / RNase |
AACAGCAGTTTCCACGACCAACAGGCCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2641547‑2641297 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcgcgtacgcgcggtTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAACGCCGGCCTCCAGTGCGCGCTCGACGATTGCGGCCTGTTGGTCGTGGAAACTGCTG > AE015451/2641315‑2641545 AACAGCAGTTTCCACGACCAACAGGCCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAAC > 1:1030172/1‑235 TCCACGACCAACAGGCCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTAC < 2:984518/234‑1 CCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGC < 2:1079108/215‑1 GCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGTTCGCTCAG < 1:859219/221‑1 GTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGTTCGCTCAG > 1:731199/1‑202 ACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGC < 2:505683/165‑1 ACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGC > 1:505685/1‑165 CTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCCCCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCT < 1:161330/186‑1 CAACTGGATGCCAGCGGCGCGCACCTTTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATC < 1:785236/169‑1 CTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGCCTGTTGCTGCGCGAACCGCGCGCACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCG > 2:10753/1‑109 AGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGT > 1:252940/1‑58 GCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGCGGGTGCACGCCGGCCG > 2:390823/1‑141 CGACAGCGAGCGCCGGCTGCGACTGGTGCTGAGCGACCCGCGCGGACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTC < 2:428878/83‑1 CTGAGCGAACCGCGCGTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAAC > 2:731197/1‑202 CGCGCGTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAACGCCGGCCCCCAGTGC > 2:675036/1‑207 GCGGACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTA < 2:1400504/187‑1 TACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAACGCCGGCCTCCAGTGCGCGCTCGACGATTGCGGCCTGTTGGTCGTGGAAAC > 1:1120126/1‑236 ACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCT > 2:252938/1‑58 GCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAACGCCGGCCTCCAGTGCGCGCTCGACGATTGCGGCCTGTTGGTCGTGGAAACTGCTG > 1:763753/1‑236 AACAGCAGTTTCCACGACCAACAGGCCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2641547‑2641297 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcgcgtacgcgcggtTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAACGCCGGCCTCCAGTGCGCGCTCGACGATTGCGGCCTGTTGGTCGTGGAAACTGCTG > AE015451/2641315‑2641545 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |