| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 3643464 = | 73 (0.850) | 5 (0.060) | 4/336 | NT | 6.9% | coding (583/804 nt) | PP_3210 | ABC transporter, permease protein |
| ? | AE015451 | 3643546 = | 67 (0.830) | coding (501/804 nt) | PP_3210 | ABC transporter, permease protein | |||||
GTGGCCATCGCGCCGCTGATCATCATCTGGTGCAGCGACACGACCTTGGCGTTGGTGATCTGCGCCACGCTGGTGGCGATCTTCCCGATCATCGCCAACACCGTCCTGGGCCTGCGCAGCGTCAACCCTGGCCTGCTCAACCTGTTCCATCTGAACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGCCAGCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3643707‑3643464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcggctGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCAGGACGGTGTTGGCGATGATCGGGAAGATCGCCACCAGCGTGGCGCAGATCACCAACGCCAAGGTCGTGTCGCTGCACCAGATGATGATCAGCGGCGCGATGGCCACCACCGGCGTTACCTGCAGCAGGATCGCATAGGGAAACAGACTGGCCTCCACGACGCGGCTCTGCACGAAC > AE015451/3643546‑3643777 GTGGCCATCGCGCCGCTGATCATCATCTGGTGCAGCGACACGACCTTGGCGTTGGTGATCTGCGCCACGCTGGTGGCGATCTTCCCGATCATCGCCAACACCGTCCTGGGCCTGCGCAGCGTCAACCCTGGCCTGCTCAACCTGTTCCATCTGAACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGC > 1:1209314/1‑236GTGGCCATCGCGCCGCTGATCATCATCTGGTGCAGCGACACGACCTTGGCGTTGGTGATCTGCGCCACGCTGGTGGCGATCTTCCCGATCATCGCCAACACCGTCCTGGGCCTGCGCAGCGTCAACCCTGGCCTGCTCAACCTGTTCCATCTGAACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGC > 1:948703/1‑236 GCGCCGCTGATCATCATCTGGTGCAGCGACACGACCTTGGCGTTGGTGATCTGCGCCACGCTGGTGGCGATCTTCCCGATCATCGCCAACACCGTCCTGGGCCTGCGCAGCGTCAACCCTGGCCTGCTCAACCTGTTCCATCTGAACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGCCAGCGGCTG < 1:772954/236‑1 GCGACACGACCTTGGCGTTGGTGATCTGCGCCACGCTGGTGGCGATCTTCCCGATCATCGCCAACACCGTCCTGGGCCTGCGCAGCGTCAACCCTGGCCTGCTCAACCTGTTCCATCTGAACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCG < 2:528009/201‑1 CCAACACCGTCCTGGGCCTGCGCAGCGTCAACCCTGGCCTGCTCAACCTGTTCCATCTGAACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGCCc > 2:114210/1‑143 CCTGTTCCCTCTGAACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCATACCGTGCTTTTTCGCTGGCCTGCGCATCGCCAGCGGCTGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCAG < 2:1428409/161‑1 GTTCCATCTGAACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGCCAGCGGCTGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTG < 1:707723/147‑1 tgcACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGCCAGCGGCTGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAG < 1:781381/125‑1 CAGCCGCTGGCAAGTGCTGGTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGCCAGCGGCTGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCAG < 1:71093/140‑1 CCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGCCAGCGGCTGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCA < 2:1425219/136‑1 gCGCCAGCGGCTGGCGCGGTGCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCAGGACGGTGTTGGCGATGATCGGGAAGATCGCCACCAGCGTGGCGCAGATCACCAACGCCAAGGTCGTGTCGCTGCACCAGATGATGATCAGCGGCGCGATGGCCACCACCGGCGTT < 2:268974/183‑1 AGCGGCTGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCAGGACGGTGTTGGCGATGATCGGGAAGATCGCCACCAGCGTGGCGCAGATCACCAACGCCAAGGTCGTGTCGCTGCACCAGATGATGATCAGCGGCGCGATGGCCACCACCGGCGTTACCTGCAGCAGGATCGCATAGGGAAACAGACTGGCCTCCACGA > 2:681707/1‑222 CGGCTGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCT < 2:417211/50‑1 GGCTGGCGCGGTTCAGATGGACCAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCAGGACGGTGTTGGCGATGATCGGGAAG < 1:63659/86‑1 GCTGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCAGGACGGTGTTGGCGATGATCGGGAAGATCGCCACCAGCGTGGCGCAGATCACCAACGCCAAGGTCGTGTCGCTGCACCAGATGATGATCAGCGGCGCGATGGCCACCACCGGCGTTACCTGCAGCAGGATCGCATAGGGAAACAGACTGGCCTCCACGACGCGGCTCTGCACGAAC < 1:786966/235‑1 CTGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCAGGACGGTGTTGGCGATGATCGGGAAGATCGCCACCAGCGTGGCGCAGATCACCAACGCCAAGGTCGTGTCGCTGCACCAGATGATGATCAGCGGCGCGATGGCCACCACCGGCGTTACCTGCAGCAGGATCGC > 2:579964/1‑191 GTGGCCATCGCGCCGCTGATCATCATCTGGTGCAGCGACACGACCTTGGCGTTGGTGATCTGCGCCACGCTGGTGGCGATCTTCCCGATCATCGCCAACACCGTCCTGGGCCTGCGCAGCGTCAACCCTGGCCTGCTCAACCTGTTCCATCTGAACCGCGCCAGCCGCTGGCAAGTGCTGTTGCGCCTGCGCATTCCCAGCGCCTTACCGTGCTTTTTCGCTGGCCTGCGCATCGCCAGCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3643707‑3643464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcggctGGCGCGGTTCAGATGGAACAGGTTGAGCAGGCCAGGGTTGACGCTGCGCAGGCCCAGGACGGTGTTGGCGATGATCGGGAAGATCGCCACCAGCGTGGCGCAGATCACCAACGCCAAGGTCGTGTCGCTGCACCAGATGATGATCAGCGGCGCGATGGCCACCACCGGCGTTACCTGCAGCAGGATCGCATAGGGAAACAGACTGGCCTCCACGACGCGGCTCTGCACGAAC > AE015451/3643546‑3643777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |