New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4053468 =	58 (0.670)	7 (0.090)	7/340	NT	11.5%	coding (42/1320 nt)	PP_3573	putative Monooxygenase
	?	AE015451	4053485 =	52 (0.630)					coding (59/1320 nt)	PP_3573	putative Monooxygenase

GCGTACGTACTGCTCGAAGTAGTCGGCCACCTGGTCCTTGCCGGCGAATGCATCGGCGTCGAGGTTGAATTCCAGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4053699‑4053468 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcgTGGCCATGAGCGAACACCTGAGCAAGCTTGGCGTGCCGCACCTGGTACTGGAGCGCAACCGCATCGCGCAGGCCTGGCGTACCGGCCGCTGGGACTCGCTGGTCGCCAACGGCCCGGCCTGGCACGACCGCTTCCCGGGGCTGGAATTCAAC  >  AE015451/4053485‑4053636                                                                                                                                                                                                                                                                                                                                                                                                  GCGTACGTACTGCTCGAAGTAGTCGGCCACCTGGTCCTTGCCGGCGAATGCATCGGCGTCGAGGTTGAATTCCAGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGC                                                                                                                                                      <  1:1454895/236‑1  CGTACGTACTGCTCGAAGTAGTCGGCCACCTGGTCCTTGCCGGCGAATGCATCGGCGTCGAGGTTGAATTCCAGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGG                                                                                                                                                       <  2:1415745/234‑1                GAAGTAGTCGGCCACCTGGTCCTTGCCGGCGAATGCATCGGCGTCGAGGTTGAATTCCAGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCG                                                                                                                                                          >  1:114152/1‑217                  AGTAGTCGGCCACCTGGTCCTTGCCGGCGAATGCATCGGCGTCGAGGTTGAATTCCAGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGG                                                                                                                                                            >  2:580356/1‑213                                      tgGCCGGCGAATGCATCGGCGTCGAGGTTGAATTCCAGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGACCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGC                                                                                                                                                           <  2:865076/192‑1                                                                                       GGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAGCGAACACCTGAGCAAGCTTGGCGTGCCGCACCTGG                                                                                                             <  1:175935/191‑1                                                                                                                      CGAGTCCCAGCGGCCGGTACGCCAGGCCGGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAGCGAACACCTGAGCAAGCTTGGCGTGCC                                                                                                                     <  1:1475714/152‑1                                                                                                                        AGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCG                                                                                                                                                             >  2:179764/1‑110                                                                                                                                                      CGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAG                                                                                                                                                >  1:537546/1‑93                                                                                                                                                      CGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAG                                                                                                                                                <  2:537544/93‑1                                                                                                                                                            GGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAGCGAACACCTGAGC                                                                                                                                   >  1:1179027/1‑100                                                                                                                                                            GGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAGCGAACACCTGAGC                                                                                                                                   <  2:1179024/100‑1                                                                                                                                                                                     CACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAGCGAACACCTGAGCAAGCTTGGCGTGCCGC                                                                                                                   <  1:445571/91‑1                                                                                                                                                                                                                                      GCGTGGCCATGAGCGACCACCTGAGCAAGCTTGGCGTGCCGCACCTGGTACTGGAGCGCAACCGCATCGCGCAGGCCTGGCGTACCGGCCGCTGGGACTCGCTGGTCGCCAACGGCCCGGCCTGG                                <  2:425850/125‑1                                                                                                                                                                                                                                      GCGTGGCCATGAGCGAACACCTGAGCAAGCTTGGCGTGCCGCACCTGGTACTGGAGCGCAACCGCATCGCGCAGGCCTGGCGTACCGGCCGCTGGGACTCGCTGGTCGCCAACGGCCCGGCCTGGCACGACCGCTTCCCGGGGCTGGAATTCAAC  >  2:426921/1‑155                                                                                                                                                                                                                                      GCGTGGCCATGAGCGAACACCTGAGCAAGCTTGGCGTGCCGC                                                                                                                   <  1:781319/42‑1                                                                                                                                                                                                                                                                                                                                                                                                  GCGTACGTACTGCTCGAAGTAGTCGGCCACCTGGTCCTTGCCGGCGAATGCATCGGCGTCGAGGTTGAATTCCAGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4053699‑4053468 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcgTGGCCATGAGCGAACACCTGAGCAAGCTTGGCGTGCCGCACCTGGTACTGGAGCGCAACCGCATCGCGCAGGCCTGGCGTACCGGCCGCTGGGACTCGCTGGTCGCCAACGGCCCGGCCTGGCACGACCGCTTCCCGGGGCTGGAATTCAAC  >  AE015451/4053485‑4053636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.