| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 4087702 | 55 (0.640) | 7 (0.090) | 6/338 | NT | 12.2% | intergenic (+351/‑75) | PP_3597/PP_3598 | Amino‑acid ABC transporter, ATP‑binding protein/Peptidase C26 |
| ? | AE015451 | = 4087719 | 49 (0.600) | intergenic (+368/‑58) | PP_3597/PP_3598 | Amino‑acid ABC transporter, ATP‑binding protein/Peptidase C26 | |||||
TTCAAGTTACCTAATCATTGCGCCGCTGCAATGACCCAACTGCATCGTTAAATATTATTGACCGCAGACCCTGCCAAACCCACGCCGCCACAGGCCCGCATCGGTTTCAGCCCCCAGAAAACGGCGTATCCCCCGCGTTAAAGCCCGCTTCCGTCGTTTGACATATCGAACGGCTCTGGCAAGCTATCTACAAGCCCCGACCGGAATCGTCGCCTCTGACGAGCCGGCAGTGCTCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4087463‑4087702‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggggcCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGGATACGCCGTTTTCTGGGGGCTGAAACCGATGCGGGCCTGTGGCGGCGTGGGTTTGGCAGGGTCTGCGGTCAATAATATTTAACGATGCAGTTGGGTCATTGC < AE015451/4087719‑4087490 TTCAAGTTACCTAATCATTGCGCCGCTGCAATGACCCAACTGCATCGTTAAATATTATTGACCGCAGACCCTGCCAAACCCACGCCGCCACAGGCCCGCATCGGTTTCAGCCCCCAGAAAACGGCGTATCCCCCGCGTTAAAGCCCGCTTCCGTCGTTTGACATATCGAACGGCTCTGGCAAGCTATCTACAAGCCCCGACCGGAATCGTCGCCTCTGACGAGCCGGCAGTGC < 2:625442/233‑1 TGACCGCAGACCCTGCCAAACCCACGCCGCCACAGGCCCGCATCGGTTTCAGCCCCCAGAAAACGGCGTATCCCCCGCGTTAAAGCCCGCTTCCGTCGTTTGACATATCGAACGGCTCTGGCAAGCTATCTACAAGCCCCGACCGGAATCGTCGCCTCTGACGAGCCGGCAGTGCTCGGGG > 1:280622/1‑181 CCCGCTTCCGTCGTTTGACATATCGAACGGCTCTGGCAAGCTATCTACAAGCCCCGACCGGAATCGTCGCCTCTGACGAGCCGGCAGTGCTCGGGGCCTTGGGTGCTGCCTGTAGCC > 1:1159548/1‑117 CCCGCTTCCGTCGTTTGACATATCGAACGGCTCTGGCAAGCTATCTACAAGCCCCGACCGGAATCGTCGCCTCTGACGAGCCGGCAGTGCTCGGGGCCTTGGGTGCTGCCTGTAGCC < 2:1159545/117‑1 GAACGGCTCTGGCAAGCTATCTACAAGCCCCGACCGGAATCGTCGCCTCTGACGAGCCGGCAGTGCTCGGGGCCTTGGGCGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGGCGGGGCTTGTAGATAGCCTGCCAGAGCC > 1:221586/1‑159 ACCGGAATCGTCGCCTCTGACGAGCCGGCAGTGCTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGCGGCGACGATTCCGGTCGGGGCTTGTAGATAGCc > 2:314132/1‑116 ACCGGAATCGTCGCCTCTGACGAGCCGGCAGTGCTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCATGTAGATAGC > 1:1042198/1‑116 CGGAATCGTCGCCTCTGACGAGCCGGCAGTGCTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGg > 1:558279/1‑77 GACGAGCCGGCAGTGCTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCT > 2:893642/1‑59 CTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGGATACGCCGTTTTCTGGGGGCTGAAACCGATGCGGGCCTGTGGCGGCGTGGGTTTGGCAGGGTCTGCGGGCAATAATATTTAACGATGCAGTTGGGGCATT > 1:272553/1‑236 CTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGGATACGCCGTTTTCTGGGGGCTGA > 2:912601/1‑159 GGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGGATACGCCGTTTTCTGGGGGCTGAAACCGATGCGGGCCTGTGGCGGCGTGGGTTTGGCAGGGTCTGCGGTCAATAATATTTAACGATGCAGTTGGGTCATTGC > 1:736958/1‑235 GGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGGATACGCCGTTTTCTGGGGGCTGAAACCGATGCGGGCCTGTGGCGGCGTGGGTTTGGCAGGGTCTGCGGTCAATAATATTTAAC > 1:923967/1‑216 GGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGGATACGCCGTTTTCTGGGGGCTGAAACCGATGCGGGCCTGTGGCGGCGTGGGTTTGGCAGGGTCTGCGGTCAATAATATTTAAC < 2:923965/216‑1 GGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGG < 1:285038/133‑1 GGCCTTGGGTGCTGCCTGTAGCCTCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGGATACGCCGTTTTCTGGGGGCTGAAACCGATGCGGGCCTGTGGCGGCGTGGGTTTGGCAGGGTCTGCGGTCAATAATATTTAACGA < 1:308689/216‑1 GGCCTTGGGTGCTGCCTGTAGCCCCGGGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGA < 1:747091/111‑1 GGCCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGGATACGCCGTTTTCTGGGGGCTGAACCCGATGCc > 1:1036352/1‑163 TTCAAGTTACCTAATCATTGCGCCGCTGCAATGACCCAACTGCATCGTTAAATATTATTGACCGCAGACCCTGCCAAACCCACGCCGCCACAGGCCCGCATCGGTTTCAGCCCCCAGAAAACGGCGTATCCCCCGCGTTAAAGCCCGCTTCCGTCGTTTGACATATCGAACGGCTCTGGCAAGCTATCTACAAGCCCCGACCGGAATCGTCGCCTCTGACGAGCCGGCAGTGCTCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4087463‑4087702‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggggcCTTGGGTGCTGCCTGTAGCCCCGAGCACTGCCGGCTCGTCAGAGGCGACGATTCCGGTCGGGGCTTGTAGATAGCTTGCCAGAGCCGTTCGATATGTCAAACGACGGAAGCGGGCTTTAACGCGGGGGATACGCCGTTTTCTGGGGGCTGAAACCGATGCGGGCCTGTGGCGGCGTGGGTTTGGCAGGGTCTGCGGTCAATAATATTTAACGATGCAGTTGGGTCATTGC < AE015451/4087719‑4087490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |