New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5387029 =	62 (0.720)	4 (0.050)	4/338	NT	5.8%	coding (539/2811 nt)	dld2	D‑lactate dehydrogenase
	?	AE015451	5387125 =	71 (0.870)					coding (635/2811 nt)	dld2	D‑lactate dehydrogenase

CGTACGTGACGGCGCTGATGAAGCCCAGCGTGCCTTCGGAGCCGACCAGCAGGTGCTGCAGGATGTCCAGCGGCTGGTCGTAGTCCACCAGTGCGTTCAGTGACAGGCCCGTGGTGTTCTTCAGCCGGTATTTGTGCCGGATGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTTCCAGCAGCTCGGCGTGGCTGCTTTCGAAGGCGGCGACGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5387271‑5387029 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggccgAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACG  >  AE015451/5387125‑5387193                                                                                                                                                                                                                                                                                                                          CGTACGTGACGGCGCTGATGAAGCCCAGCGTGCCTTCGGAGCCGACCAGCAGGTGCTGCAGGATGTCCAGCGGCTGGTCGTAGTCCACCAGTGCGTTCAGTGACAGGCCCGTGGTGTTCTTCAGCCGGTATTTGTGCCGGATGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTTCCAGCAGCTCGGCGTGGCTGCTTTCGAAGGCGGCGAC                                                                               >  1:863107/1‑235                                                                             GTCGTAGTCCACCAGTGCGTTCAGTGACAGGCCCGTGGTGTTCTTCAGCCGGTATTTGTGCCGGATGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTTCCAGCAGCTCGGCGTGGCTGCTTTCGAAGGCGGCGACGCTGGCC                                                                        >  2:1502236/1‑166                                                                                      CACCAGTGCGTTCAGTGACAGGCCCGTGGTGTTCTTCAGCCGGTATTTGTGCCGGATGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTTCCAGCAGCTCGGCGTGGCTGCTTTCGAAGGCGGCGACGCTGGCCG                                                                       <  2:307360/158‑1                                                                                                                                              aagaccCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTTCCAGCAGCTCGGCGTGGCTGCTTTCGAAGGCGGCGACGCTGGCCGAGCGCATCCGGCACAAACACCGGCTGAAGAACAC                                     <  2:623782/130‑1                                                                                                                                              TGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTTCCAGCAGCTCGGCGTGGCTGCTTTCGAAGGCGGCGACGCTGGCCGAGCGCA                                                                 <  2:1154382/108‑1                                                                                                                                                                                          CGGGCCAGTGCTTCCAGCAGCTCGGCGTGGCTGCTTTCGAAGGCGGCGACGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACG  >  1:252176/1‑127                                                                                                                                                                                          CGGGCCAGTGCTTCCAGCAGCTCGGCGTGGCTGCTTTCGAAGGCGGCGACGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACG  <  2:252174/127‑1                                                                                                                                                                                                                                                                                                                          CGTACGTGACGGCGCTGATGAAGCCCAGCGTGCCTTCGGAGCCGACCAGCAGGTGCTGCAGGATGTCCAGCGGCTGGTCGTAGTCCACCAGTGCGTTCAGTGACAGGCCCGTGGTGTTCTTCAGCCGGTATTTGTGCCGGATGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTTCCAGCAGCTCGGCGTGGCTGCTTTCGAAGGCGGCGACGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5387271‑5387029 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggccgAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACG  >  AE015451/5387125‑5387193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.