| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5822187 = | 100 (1.160) | 4 (0.050) | 3/324 | NT | 4.3% | coding (147/435 nt) | PP_5099 | conserved protein of unknown function |
| ? | AE015451 | 5822203 = | 89 (1.140) | coding (163/435 nt) | PP_5099 | conserved protein of unknown function | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCGCCGGTTTCGATGTTCAAGTCGAAGGTGACGGTTTCTGGCTGATCGATCTTGAACTGGGCGATGTAATACACCGCGCCCTGTTCGGTAATCTGCTTGAACGACAGCGGGCTGCTGCGCCCGGTCAGGTCACTGACCTTACCGCTGACCAGTGCTGGGGTGGGCTTGCCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGCGGCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5822426‑5822187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggccgcggccaccGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCA > AE015451/5822203‑5822398 CCGCCGGTTTCGATGTTCAAGTCGAAGGTGACGGTTTCTGGCTGATCGATCTTGAACTGGGCGATGTAATACACCGCGCCCTGTTCGGTAATCTGCTTGAACGACAGCGGGCTGCTGCGCCCGGTCAGGTCACTGACCTTACCGCTGACCAGTGCTGGGGTGGGCTTGCCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGC < 2:1220872/233‑1 CGGTTTCGATGTTCAAGTCGAAGGTGACGGTTTCTGGCTGATCGATCTTGAACTGGGCGATGTAATACACCGCGCCCTGTTCGGTAATCTGCTTGAACGACAGCGGGCTGCTGCGCCCGGTCAGGTCACTGACCTTACCGCTGACCAGTGCTGGGGTGGGCTTGCCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGCGGCCAC < 1:604848/235‑1 CGGTAATCTGCTTGAACGACAGCGGGCTGCTGCGCCCGGTCAGGTCACTGACCTTACCGCTGACCAGTGCTGGGGTGGGCTTGCCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTG < 1:850604/195‑1 GGTAATCTGCTTGAACGACAGCGGGCTGCTGCGCCCGGTCAGGTCACTGACCTTACCGCTGACCAGTGCTGGGGTGGGCTTGCCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGCGGCC < 1:1040228/151‑1 TTGAACGACAGCGGGCTGCTGCGCCCGGTCAGGTCACTGACCTTACCGCTGACCAGTGCTGGGGTGGGCTTGCCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGC > 2:455727/1‑137 CCGGTCAGGTCACTGACCTTACTGCTGACCAGTACTGGGGTGGGCTTGCCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCAGGTGGCCGCGGCCACCGGTCTGGTGCGCAGCAAGAAtc < 1:924071/142‑3 TGGGCTTGCCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGC > 1:371920/1‑73 CCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACAAGGCCGGTGGCCGCGGCCACCGGCCTGGCGCGCAGCAAGAACCAGGGCGTGCTCAAAATTGCCGTGCTCAAGGCCGGCAA < 1:1403385/131‑1 tGCCTTGAGCACGGCAATGTTGTGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGC < 2:1393047/62‑1 GCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCACGCCCACCCCAGCACTGGTCAGCGGTAAG > 2:762996/1‑149 GCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCA > 2:855635/1‑208 GCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATC > 1:1238589/1‑171 GCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATC < 2:1238586/171‑1 GCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCA > 2:371918/1‑73 CCGCCGGTTTCGATGTTCAAGTCGAAGGTGACGGTTTCTGGCTGATCGATCTTGAACTGGGCGATGTAATACACCGCGCCCTGTTCGGTAATCTGCTTGAACGACAGCGGGCTGCTGCGCCCGGTCAGGTCACTGACCTTACCGCTGACCAGTGCTGGGGTGGGCTTGCCGGCCTTGAGCACGGCAATGTTGAGCACGCCCTGGTTCTTGCTGCGCACCAGGCCGGTGGCCGCGGCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5822426‑5822187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggccgcggccaccGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCA > AE015451/5822203‑5822398 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |