New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 6029225 =123 (1.430)10 (0.130) 8/330 NT 8.5% coding (236/1494 nt) kauB 4‑guanidinobutyraldehyde dehydrogenase
?AE015451 6029308 = 100 (1.250)coding (153/1494 nt) kauB 4‑guanidinobutyraldehyde dehydrogenase

GGAGTTTCGTATGACCACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGAATACACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/6029470‑6029225
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgcagctggcAACCTTGGCCAGGAAGCGTCCGTCGACCGGGCTCAGGCACTCGAAGGTTTCACCGGATACGGCATCGGTGTATTCGCCGTTGATGAAGGCACGGCCTTCGATCTTCAGTTGCTGGGCACGTTGTTCCCAGTCCGCACGGGTCAGGGTGGTCATACGAAACTCCTCCTCTTGTTTAGGTGCAACGCCGCACTGAGGACTCACAGGCGTTGTCAGAATTCTGGCCGGGCGCCAAGC  >  AE015451/6029308‑6029541
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
GGAGTTTCGTATGACCACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGAATACACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGG                                                                                                                                                                                                                                                       >  1:1506681/1‑235
 GAGTTTCGTATGACCACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGAATACACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGT                                                                                                                                                                                                                                                      <  1:1277286/235‑1
 GAGTTTCGTATGACCACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGAATACACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGG                                                                                                                                                                                                                                                       >  1:1214060/1‑234
   GTTTCGTATGACCACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGAATACACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGC                                                                                                                                                                                                                                                   <  1:290811/236‑1
   GTTTCGTATGACCACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGAATACACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCG                                                                                                                                                                                                                                                    >  1:356224/1‑235
        GTATGACCACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGAATACACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGCT                                                                                                                                                                                                                                               >  1:1229651/1‑235
                                                        TGAAGAGCGAAGGCCGTGCCTTCATCAACGGCGAATCCACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGCTGGCAACCTTGGCCAGG                                                                                                                                                                                                                               <  1:412598/203‑1
                                                                  AGGCCGTGCCTTCATCAACGGCGAATACACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGCTGGCAACCTTGGCCAGGAAGCGTCCGTCGACCGGGCTCAGGCACTCGAAGGTTTCACCGG                                                                                                                                                                                    <  1:100957/236‑1
                                                                                   ACGGCGAATACACCTATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGCTGGCAACCTTGGCCAGGAAGCGTCCGTCGACCGGGCTCAGGCACTCGAAG                                                                                                                                                                                              <  1:77871/209‑1
                                                                                                    GCCGTAGCCGGTGAAACATTCGAGTGCCTGATCCCGGTCGACGGACGCTGCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCGTCAACTCCGGCGTGTGGTCGCAGCTGGCAACCTTGGCCAGGAAGCGTCCGTC                                                                                                                                                                                                                    <  2:115665/170‑1
                                                                                                     CCGTATCCGATGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGCTGGCAACCTTGGCCAGGAAGCGTCCGTC                                                                                                                                                                                                                    <  2:561742/169‑1
                                                                                                                      TTCGAGGGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGGCAGCTGCGGCCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGC                                                                                                                                                                                                                                                <  1:123963/124‑1
                                                                                                                                  acCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGCTGGCAACCTTGGCCAGGAAGCGTCCGTCGACCGGGCTCAGGCACTCGAAGGTT                                                                                                                                                                                           <  1:1304780/163‑1
                                                                                                                                               GACGCTTCCTGGACAAGGTTGCCAGCTGCACCCTGGCCGATGCCAACCGCGCTGTTGAAACCGCCCGTGCCACCTTCATCTCCGGCGTGTGGTCGCAGCTGGCAACCTTGGCCAGGAAGCGTCCGTC                                                                                                                                                                                                                    <  2:363446/127‑1
                                                                                                                                                                                                              CCCGTGCCACCTTCAAGTCCGGCGTCTGGTCGCGGCTGGCAGCCTTGGCCAGGAAGCGGCCGTCGACCGGGCTCAGGCACTCGAAGGTTTCACCGGATACGGCATCGGTGTATTCGCCGTTGATGAAGGCACGGCCTTCGATCTT                                                                                                                                   <  1:675526/145‑1
                                                                                                                                                                                                                             ACTCCGGCGTGTGGTCGCGGCTGGCAACGTTGGCCAGGAAGCGTCCGTCGACCGGGCTCAGGCACTCGAAGGTTTCACCGGATACGGCATCGGTGTATTCGCCGTTGATGAAGGCACGGCCTTCGATCTTCAGTTGCTGGGCA                                                                                                                      <  2:629391/143‑1
                                                                                                                                                                                                                              CTCAGGCGTGTGGTCGCAGCTGGCATCCTTGGCCAGGAAGCGTCTGTCGACCGGGCTCAGGCACTCGAAGGTTTCACCGGATACGGCATCGGTGTATTCG                                                                                                                                                                <  2:1145448/100‑1
                                                                                                                                                                                                                                              CAGCTGGCAACCTTGGCCAGGAAGCGTCCGTCGACCGGGCTCAGGCACTCGAAGGTTTCACCGGATACGGCATCGGTGTATTCGCCGTTGATGAAGGCACGGCCTTCGATCTTCAGTTGCTGGGCACGTTGTTCCCAGTCCGCACGGGTCAGGGTGGTCATACGAAACTCCTCCTCTTGTTTAGGTGCAACGCCGCACTGAGGACTCACAGGCGTTGTCAGAATTCTGGCCGGGC         <  1:1328200/235‑1
                                                                                                                                                                                                                                                GCTGGCAACCTTGGCCAGGAAGCGTCCGTCGACCGGGCTCAGGCACTCGAAGGTTTCACCGGATACGGCATCGGTGTATTCGCCGTTGATGAAGGCACGGCCTTCGATCTTCAGTTGCTGGGCACGTTGTTCCCAGTCCGCACGGGTCAGGGTGGTCATACGAAACTCCTCCTCTTGTTTAGGTGCAACGCCGCACTGAGGACTCACAGGCGTTGTCAGAATTCTGGCCGGG          <  2:789717/232‑1
                                                                                                                                                                                                                                                    GCAACCTGGGCCAGGAAGCGTCCGTCGACCGGGCTCAGGCACTCGAAGGTTTCACCGGATACGGCATCGGTGTATTCGCCGTTGATGAAGGCACGGCCTTCGATCTTCAGTTGCTGGGCACGTTGTTCCCAGTCCGCACGGGTCAGGGTGGTCATACGAAACTCCTCCTCTTGTTTAGGTGCAACGCCGCACTGAGGACTCACAGGCGTTGTCAGAATTCTGGCCGGGCGCCAAGC  <  1:485355/236‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
GGAGTTTCGTATGACCACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGAATACACCGATGCCGTATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCTGCGACCTGGCCGATGCCAACCGCGCTGTTGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/6029470‑6029225
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgcagctggcAACCTTGGCCAGGAAGCGTCCGTCGACCGGGCTCAGGCACTCGAAGGTTTCACCGGATACGGCATCGGTGTATTCGCCGTTGATGAAGGCACGGCCTTCGATCTTCAGTTGCTGGGCACGTTGTTCCCAGTCCGCACGGGTCAGGGTGGTCATACGAAACTCCTCCTCTTGTTTAGGTGCAACGCCGCACTGAGGACTCACAGGCGTTGTCAGAATTCTGGCCGGGCGCCAAGC  >  AE015451/6029308‑6029541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.