Predicted mutation
evidence seq id position mutation freq annotation gene description
JC AE015451 5,681,415 +CGGG 100% intergenic (‑133/+71) PP_4986 ← / ← PP_4987 Channel protein, hemolysin III family/putative Chemotaxis protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 56814150 (0.000)82 (0.980)
+CGGG
61/348 NT 100% intergenic (‑133/+71) PP_4986/PP_4987 Channel protein, hemolysin III family/putative Chemotaxis protein
?AE015451 5681416 = 0 (0.000)intergenic (‑134/+70) PP_4986/PP_4987 Channel protein, hemolysin III family/putative Chemotaxis protein

GCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCTTGCACGAGCGCG  >  AE015451/5681197‑5681649
                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         
cgatcagccagatggcaccaatagcagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTa                                                                                                                                                                                                                           <  1:938628‑M2/17‑1 (MQ=255)
 gatcagccagatggcaccaatagcagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTa                                                                                                                                                                                                                           <  1:1102174‑M2/17‑1 (MQ=255)
  atcagccagatggcaccaatagcagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGctgctg                                                                                                                                                                                                                                     <  1:446409‑M2/7‑1 (MQ=255)
              gcaccaatagcagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgacgcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACACGGc                                                                                                                                                                                                             >  1:106731‑M2/206‑236 (MQ=255)
               cagcaatagcagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagccctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGac                                                                                                                                                                                                                    <  1:589621‑M2/24‑1 (MQ=255)
                        cagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTa                                                                                                                                                                                                                           <  2:713568‑M2/17‑1 (MQ=255)
                               gacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGacc                                                                                                                                                                                            <  1:909650‑M2/48‑1 (MQ=255)
                                   gcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacccagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTcc                                                                                                                                                                                                 <  2:760737‑M2/43‑1 (MQ=255)
                                          ccaggtgggtccaggcgtggaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgct                                                                                                                                                                                                                                      <  2:400509‑M2/6‑1 (MQ=255)
                                           caggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACaa                                                                                                                                                                                                                <  1:161021‑M2/28‑1 (MQ=255)
                                              gtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTgcgc                                                                                                                                                                              <  1:808237‑M2/62‑1 (MQ=255)
                                                 ggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTc                                                                                                                                                                                                  >  2:687389‑M2/171‑212 (MQ=255)
                                                 ggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGcc                                                                                                                                                                                    <  1:957894‑M2/56‑1 (MQ=255)
                                                 ggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGcc                                                                                                                                                                                    >  2:957892‑M2/171‑226 (MQ=255)
                                                   tccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTcaca                                                                                                                                                                        <  1:388425‑M2/68‑1 (MQ=255)
                                                      aggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggct                                                                                                                                                                                                                                         >  2:1511406‑M2/166‑168 (MQ=255)
                                                               agcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACaa                                                                                                                                                                                                                >  2:286642‑M2/157‑184 (MQ=255)
                                                                     caccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACGCCAGACCACCAGGCCCTGCGCCCca                                                                                                                                                                          >  2:1335481‑M2/151‑216 (MQ=255)
                                                                        cgtaatacatgcacacacagacctcctgaggtgggcttggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCg                                                                                                                                                                                                           <  1:441266‑M2/33‑1 (MQ=255)
                                                                           aatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTatcgcca                                                                                                                                                                                                                     >  2:141235‑M2/145‑165 (MQ=255)
                                                                                 tgcaaacacagccctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGacc                                                                                                                                                                                            <  1:598175‑M2/48‑1 (MQ=255)
                                                                                     aacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCCGGTTGCAGATCCGCGGCa                                                                                                                                       >  1:173513‑M2/135‑235 (MQ=255)
                                                                                     aacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCa                                                                                                                                       >  1:173115‑M2/135‑235 (MQ=255)
                                                                                     aacacagacctcctgaggagggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATc                                                                                                                                                                                                                         >  1:167576‑M2/135‑153 (MQ=255)
                                                                                      acacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCAc                                                                                                                                      <  1:1210359‑M2/102‑1 (MQ=255)
                                                                                       cacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCCCCTCACAt                                                                                                                                                                       >  2:505066‑M2/133‑201 (MQ=255)
                                                                                              ctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCg                                                                                                                                                                                                           >  2:598173‑M2/126‑158 (MQ=255)
                                                                                               tcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGc                                                                                                                                    <  1:1152654‑M2/104‑1 (MQ=255)
                                                                                               tcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAgccc                                                                                                                            >  1:1486592‑M2/125‑235 (MQ=255)
                                                                                                  tgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCAcc                                                                                                                                 <  2:964614‑M2/107‑1 (MQ=255)
                                                                                                   gaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGa                                                                                                                                                                                              >  2:463526‑M2/121‑166 (MQ=255)
                                                                                                   gaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg                                                                                                                                                             >  2:663994‑M2/121‑199 (MQ=255)
                                                                                                     ggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCa                                                                                                                       >  1:441078‑M2/119‑235 (MQ=255)
                                                                                                         ggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACCAGGCCGCTCCcaccc                                                                                                                                                                                                  >  2:452003‑M2/115‑154 (MQ=255)
                                                                                                           ctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgcaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGa                                                                                                                                                                                              >  1:76978‑M2/113‑158 (MQ=255)
                                                                                                           ctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTcc                                                                                                                        >  2:1046213‑M2/113‑228 (MQ=255)
                                                                                                            tgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTcc                                                                                                                                                                                                       >  1:828207‑M2/112‑148 (MQ=255)
                                                                                                              ggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcctgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCaa                                                                                                                                                              >  2:346384‑M2/110‑187 (MQ=255)
                                                                                                               acagctgttgtgatgctgatggcttcgttctttgtgggggcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgagccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGa                                                                                                                 <  1:596002‑M2/123‑1 (MQ=255)
                                                                                                                 tcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgct                                                                                                                                                                                                                                      <  2:167575‑M2/6‑1 (MQ=255)
                                                                                                                    tgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCAc                                                                                                                                      <  2:1422530‑M2/102‑1 (MQ=255)
                                                                                                                     gttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCg                                                                                                        <  2:902457‑M2/132‑1 (MQ=255)
                                                                                                                       tgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTcc                                                                                                                                                                                                       >  2:689000‑M2/101‑137 (MQ=255)
                                                                                                                         tgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCcgc                                                                                                                                           <  2:1486589‑M2/97‑1 (MQ=255)
                                                                                                                                 atggcttcgttctttgtgggagcggccttgtgtcgcgaacggggcgcgaagcggccccaggctttcattgccactgcatgcaccgccgggGCTGCTGCGCAGCCCTATCGCGACACaa                                                                                                                                                                                                                >  2:14305‑M2/91‑118 (MQ=255)
                                                                                                                                 atggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAc                                                                                                                                                                 >  2:596000‑M2/91‑165 (MQ=255)
                                                                                                                                   ggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCCGGCCCTGCGCCTCACATCCTACCCAAGGTCCCGTTGCCGATCCGCGTCa                                                                                                                                       >  2:1184535‑M2/89‑189 (MQ=255)
                                                                                                                                         gttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGaccac                                                                                                                                                                                          >  2:1065312‑M2/83‑132 (MQ=255)
                                                                                                                                              ttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcatcgccacagcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGCCCGCAcc                                                                                                                                                                                                       >  1:947605‑M2/78‑114 (MQ=255)
                                                                                                                                                     agcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGc                                                                      <  1:943136‑M2/166‑1 (MQ=255)
                                                                                                                                                     agcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGc                                                                      <  1:8787‑M2/166‑1 (MQ=255)
                                                                                                                                                       cggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCCCACCCACCTGCACCg                                                                       >  2:829338‑M2/69‑233 (MQ=255)
                                                                                                                                                          ccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGc                                                                   >  2:1024725‑M2/66‑234 (MQ=255)
                                                                                                                                                            ttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCAc                                                                                                                                                                                                    >  2:386682‑M2/64‑103 (MQ=255)
                                                                                                                                                               tgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTcc                                                            <  1:829340‑M2/176‑1 (MQ=255)
                                                                                                                                                                 tcgcgaaaggggcgcgaagctgcccgaggcttgcagtgccactgcatgaaccgccgggGCTGCTGCGCAGGCCTAGCGCGACACaa                                                                                                                                                                                                                <  2:33721‑M2/28‑1 (MQ=255)
                                                                                                                                                                 tcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCcgacccc                                                                                                                                                                                          >  2:483906‑M2/59‑106 (MQ=255)
                                                                                                                                                                  cgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACATGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGcc                                                                                                                                                                             >  2:797620‑M2/58‑120 (MQ=255)
                                                                                                                                                                  cgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGcc                                                                                                                                                                             <  1:797622‑M2/63‑1 (MQ=255)
                                                                                                                                                                  cgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGt                                                                                                      <  2:1491864‑M2/134‑1 (MQ=255)
                                                                                                                                                                  cgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGt                                                                                                      >  1:1491867‑M2/58‑191 (MQ=255)
                                                                                                                                                                  cgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTg                                                                    >  2:507788‑M2/58‑225 (MQ=255)
                                                                                                                                                                  cgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCa                                                                 <  1:1511409‑M2/171‑1 (MQ=255)
                                                                                                                                                                    cgaaaggggcgcgaagcggccccgggttttcattgccactgcatgacccgccgggGCTGCTGCGCAGCCCTATCGCGACACaa                                                                                                                                                                                                                <  2:1394981‑M2/28‑1 (MQ=255)
                                                                                                                                                                      aaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTg                                                      <  1:988748‑M2/182‑1 (MQ=255)
                                                                                                                                                                       aaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCCGGTTGCAGATcc                                                                                                                                             >  2:227855‑M2/53‑147 (MQ=255)
                                                                                                                                                                       aaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt                                                                                                                          >  2:946395‑M2/53‑166 (MQ=255)
                                                                                                                                                                       aaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTg                                                      >  2:1271642‑M2/53‑234 (MQ=255)
                                                                                                                                                                       aaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGcc                                                    >  1:1225298‑M2/53‑236 (MQ=255)
                                                                                                                                                                              gcgaagcggccccaggctttcattgcccctgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGc                                                                                                                   <  1:293977‑M2/121‑1 (MQ=255)
                                                                                                                                                                                  agcggccccaggctttcatttccactgcatgaaccgccgggGTTGCTGCGCAGCCCTATCTCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCAc                                                                                                                                  <  2:569532‑M2/106‑1 (MQ=255)
                                                                                                                                                                                        cccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACCTCCAc                                     >  1:128894‑M2/36‑234 (MQ=255)
                                                                                                                                                                                         ccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCCGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACCTccatg                                    >  2:661172‑M2/35‑232 (MQ=255)
                                                                                                                                                                                               tttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCgcgc                                                                                              <  2:1442649‑M2/142‑1 (MQ=255)
                                                                                                                                                                                                  cattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCg                                                                                                                  <  2:45685‑M2/122‑1 (MQ=255)
                                                                                                                                                                                                    ttgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGTCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAgctggc                       <  1:827519‑M2/213‑1 (MQ=255)
                                                                                                                                                                                                    ttgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGGACCCGCGCCACCTGCTCACCCACCTGCACCGCTg                                                                    >  1:288212‑M2/24‑191 (MQ=255)
                                                                                                                                                                                                      gccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCa                             <  1:901384‑M2/207‑1 (MQ=255)
                                                                                                                                                                                                          ctgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCCCCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCCCca                                            >  1:278351‑M2/18‑209 (MQ=255)
                                                                                                                                                                                                              atgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCCATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCg                                                                       >  2:60805‑M2/14‑178 (MQ=255)
                                                                                                                                                                                                              atgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAc                                                                                                                >  2:1472110‑M2/14‑137 (MQ=255)
                                                                                                                                                                                                              atgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCtt             <  1:1271645‑M2/223‑1 (MQ=255)
                                                                                                                                                                                                                gaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCtt             <  1:1144251‑M2/223‑1 (MQ=255)
                                                                                                                                                                                                                  accgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCCCCCGGCCCTGCGCCt                                                                                                                                                                            >  2:437273‑M2/10‑73 (MQ=255)
                                                                                                                                                                                                                     gccgcgGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGc                                                                                       <  2:745972‑M2/149‑1 (MQ=255)
                                                                                                                                                                                                                        gggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCCCACCCCCCTg                                                                            >  2:825273‑M2/4‑163 (MQ=255)
                                                                                                                                                                                                                         ggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTCGCTGTCGAGCTTGCACGagcgct  >  1:860257‑M2/3‑235 (MQ=255)
                                                                                                                                                                                                                          gGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCGCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCGGGCTGt                    >  1:689131‑M2/2‑217 (MQ=255)
                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         
GCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCTTGCACGAGCGCG  >  AE015451/5681197‑5681649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.