Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	926324	926603	280	30 [28]	[28] 30	PP_0805	Outer membrane efflux protein

CGGGCGCATCGCGTAGCAGCGACGGCCCGATCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGCAGTTTGGTTCCCGACCAGCGTCCAGTTGTCCGTCATGTGAACCGAGTCTT  >  AE015451/926481‑926825                                                                                                                            |                                                                                                                                                                                                                              cGGGCGCATCGCGTAGCAGCGACGGCCCGATCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCt                                                                                                                                          >  1:1062411/1‑209 (MQ=255) cGGGCGCATCGCGTAGCAGCGACGGCCCGATCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCt                                                                                                                                          <  2:1062408/209‑1 (MQ=255)   ggCGCATCGCGTAGCAGCGACGGCCCGATCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTAcc                                                                                                               >  2:1212315/1‑234 (MQ=255)            cgTAGCAGCGACGGCCCGATCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGtg                                                                                                                      >  1:775444/1‑217 (MQ=255)                 cagcGACGGCCCGATCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCtt                                                                                                <  1:1212318/235‑1 (MQ=255)                         gCCCGATCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTAcc                                                                                                               >  2:1220470/1‑212 (MQ=255)                            cGATCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTgg                                                                                    >  1:955388/1‑236 (MQ=255)                              aTCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCtt                                                                                                >  1:1033588/1‑222 (MQ=255)                              aTCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCtt                                                                                                <  2:1033585/222‑1 (MQ=255)                                cTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGtt                                                                                                                                                     >  2:1394281/1‑167 (MQ=255)                                 tGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCg                                                                                >  1:662360/1‑235 (MQ=255)                                           gggggTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTta                                                                     >  1:892705/1‑236 (MQ=255)                                              ggTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAg                                                                  <  1:1220473/236‑1 (MQ=255)                                                      tcatcGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGc                                                           >  1:651472/1‑235 (MQ=255)                                                            gCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATgg                                                                                                                              >  2:438568/1‑162 (MQ=255)                                                            gCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATgg                                                                                                                              <  1:438570/162‑1 (MQ=255)                                                            gCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTgtg                                                                       >  1:318358/1‑215 (MQ=255)                                                            gCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGc                                                    >  1:123739/1‑236 (MQ=255)                                                            gCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGGATTCACCCGACGGGTTTACcgcg                                                                                                                                              >  2:434220/1‑146 (MQ=255)                                                                caggggCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGCAGtt                                                <  1:1242829/233‑1 (MQ=255)                                                                                 aaGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGCAg                                                  >  2:1242826/1‑217 (MQ=255)                                                                                          gCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGCAGTTTGGTTCCCGACCAGCGTCCAGTTGTc                      >  1:776649/1‑236 (MQ=255)                                                                                          gCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGGCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAACCCACATGGGTACCGTTCTGTACCCACAGGTGATGGCTTGGAt                                                                                            >  2:298366/1‑166 (MQ=255)                                                                                              ggAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGCAGTTTGGTTCCCGACCAGCGTCCAGTTGTCCGTc                  >  1:1054648/1‑236 (MQ=255)                                                                                                 gCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTGCTggg                                                                       >  2:365839/1‑179 (MQ=255)                                                                                                  cccGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGCAGTTTGGTTCCCGACCAGCGTCCAGTTGTCCGTCAtgt              >  1:1046284/1‑236 (MQ=255)                                                                                                             ccAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGCAGTTTGGTTCCCGACCAGc                                 >  2:1119043/1‑206 (MQ=255)                                                                                                               aGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGCAGTTTGGTTCCCGACCAGCGTCCAGTTGTCCGTCATGTGAACCGAGTCtt  >  1:916791/1‑235 (MQ=255)                                                                                                                            aCAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATgcc                                                                                                                                                                            <  1:543593/52‑1 (MQ=255)                                                                                                                            aCAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATgcc                                                                                                                                                                            >  2:543591/1‑52 (MQ=255)                                                                                                                            |                                                                                                                                                                                                                              CGGGCGCATCGCGTAGCAGCGACGGCCCGATCTGGCGCAGGTGGGGGTCTATATCATCGGCTGCCTGGGCAACCGGGTGGAAGTTCAGGGCCAGGAGCCCGAAGGCTCCCAGCAACAGCGGTGACAGCGGACTGCTTCGCTTCACATAATTCCCTTACTGCTGGTCGTCCATGCCGCCGGGTATTCACCCGACGGGTTTACAGCGGCCTCAAACCACATGGATACCGTTCTGTACCCACAGGTGATGGCTTGGATCCTCCTGGGCCGTGTACTGGTTATAGTCGATGCCGTCGGCAGTTTGGTTCCCGACCAGCGTCCAGTTGTCCGTCATGTGAACCGAGTCTT  >  AE015451/926481‑926825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑