| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 159,909 | T→C | 5.3% | E160E (GAA→GAG) | PP_0149 ← | conserved exported protein of unknown function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 159,909 | 0 | T | C | 5.3% | 278.4 / 3.2 | 82 | E160E (GAA→GAG) | PP_0149 | conserved exported protein of unknown function |
| Reads supporting (aligned to +/- strand): ref base T (38/39); new base C (2/3); total (40/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
CGGGCGACGGCAGTTGTAGCTCGGGTCGAGGAGGAAATACTCCATGTTGACCGCGATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCG > AE015451/159684‑160131 | cGGGCGACGGCAGTTGTAGCTCGGGTCGAGGAGGAAATACTCCATGTTGACCGCGATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGc > 1:991349/1‑236 (MQ=255) gACGGCAGTTGTAGCTCGGGTCGAGGAGGAAATACTCCATGTTGACCGCGATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGAc > 1:525529/1‑235 (MQ=255) cAGTTGTAGCTCGGGTCGAGGAGGAAATACTCCATGTTGACCGCGATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGcc > 1:113425/1‑236 (MQ=255) cAGTTGTAGCTCGGGTCGAGGAGGAAATACTCCATGTTGACCACGATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGcc > 1:26039/1‑236 (MQ=255) gggTCGAGGAGGAAATACTCCATGTTGACCGCGATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCtt < 1:138287/235‑1 (MQ=255) cGAGGAGGAAATACTCCATGTTGACCGCGATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTgg > 1:183925/1‑236 (MQ=255) aTGTTGACCGCGATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAAt > 1:1338691/1‑236 (MQ=255) cgcgATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCCTTCCTCCGGCAGGCCGAccc > 2:348547/1‑190 (MQ=255) gggCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCca < 1:1044048/236‑1 (MQ=255) gctgctCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCgg > 1:946328/1‑224 (MQ=255) gctgctCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCca > 1:967624/1‑234 (MQ=255) tgctCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCa < 2:440722/162‑1 (MQ=255) tgctCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCa > 1:440724/1‑162 (MQ=255) ctCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCGGAAGAATGCCGCGGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGc < 1:707583/235‑1 (MQ=255) tCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCgg < 1:1091579/236‑1 (MQ=255) aaCTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGc > 2:606229/1‑225 (MQ=255) cTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCATCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCa < 1:718340/155‑1 (MQ=255) cTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCgg < 2:525527/232‑1 (MQ=255) tCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACg < 1:585142/236‑1 (MQ=255) cATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCGGAAGAATGCCGCGGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACgg < 1:1382487/236‑1 (MQ=255) aTAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCgg > 2:859912/1‑212 (MQ=255) aTAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCgg < 1:1159351/229‑1 (MQ=255) tGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTgg > 1:768058/1‑176 (MQ=255) gCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATggg < 1:1447431/236‑1 (MQ=255) tGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTg < 1:175418/236‑1 (MQ=255) gcgcACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGa < 2:608409/143‑1 (MQ=255) cgcACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAg < 1:156493/236‑1 (MQ=255) gcACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAg > 1:1469213/1‑235 (MQ=255) cACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGGGATGGGTGAGc > 1:658699/1‑235 (MQ=255) aCGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCGGAAGAATGCCGCGGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCggg > 1:330891/1‑211 (MQ=255) aaTTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCgg < 2:437290/207‑1 (MQ=255) ggCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTgcag > 1:1092943/1‑235 (MQ=255) cATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACg > 1:1274351/1‑236 (MQ=255) gCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCCGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGc > 1:1007137/1‑235 (MQ=255) ttCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCcagc < 1:1152723/235‑1 (MQ=255) cgcgCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCTGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCt > 1:355256/1‑134 (MQ=255) gcTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCgg < 1:357843/185‑1 (MQ=255) cGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTc > 1:1320235/1‑190 (MQ=255) gCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCGGAAGAATGCCGCGGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCgg < 2:330889/181‑1 (MQ=255) gCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCATAGAGATGGGTGAGCTCGTGCAGCACGGTGGCcagc < 2:711527/226‑1 (MQ=255) ccTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCgg < 1:861676/163‑1 (MQ=255) cTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGGCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGctct < 1:1026702/230‑1 (MQ=255) cgtcgGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCAc > 1:1478259/1‑236 (MQ=255) cgtcgGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCAc > 1:1267572/1‑236 (MQ=255) gTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGt < 1:170504/176‑1 (MQ=255) tACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCAc < 2:651764/220‑1 (MQ=255) ctgctgCCACCCGGCCAGGGCGAGCAGGCGTGGGTAGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCAc < 1:353216/218‑1 (MQ=255) gcCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGcggtc < 1:859914/235‑1 (MQ=255) cGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGt > 1:499745/1‑116 (MQ=255) cGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGt < 2:499743/116‑1 (MQ=255) ccAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTa > 1:905356/1‑236 (MQ=255) aGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTg < 2:823210/105‑1 (MQ=255) aGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCt > 2:1127810/1‑172 (MQ=255) gcggCGTGGGTCGTCGCCCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGcgg < 1:357089/212‑1 (MQ=255) ggCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACg < 2:1001316/173‑1 (MQ=255) gCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCgg < 2:1304959/136‑1 (MQ=255) cGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTgg < 2:1389941/124‑1 (MQ=255) gggTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCAt > 1:876861/1‑235 (MQ=255) ggTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTg > 2:1297991/1‑212 (MQ=255) gtcgtcGCGCAGGGGGACGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGGCCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGGGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGt < 2:410517/140‑1 (MQ=255) cgtcgCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACg > 2:1479979/1‑133 (MQ=255) cTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGc > 1:541465/1‑223 (MQ=255) cTCAGGGTGAAGCGGCGCTCGGCCGGCCCGCGGCATTCTTACGGGAGGCCGACCTGGCCCAGCGTGCCTTGATGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGgc > 2:501510/1‑107 (MQ=255) ggTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAgcgcc > 2:80948/1‑93 (MQ=255) gAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGgcag > 1:1341616/1‑234 (MQ=255) cgcggcgCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTg < 2:149523/175‑1 (MQ=255) tCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACg > 2:1035347/1‑110 (MQ=255) tCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACg < 1:1035350/110‑1 (MQ=255) tCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCCCCGTGCCAt > 2:873154/1‑172 (MQ=255) tCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCg < 2:1478256/213‑1 (MQ=255) tCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGAGGGGTGAGCTCGTGCAGCACGGTGGCCagcagcg > 2:513220/1‑153 (MQ=255) cGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGcgg < 1:173148/179‑1 (MQ=255) ggCCTGCCCGCGGCATTCTTCCGGCAGGCCGCCCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGgcagc < 1:348549/223‑1 (MQ=255) ggCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCCGCGTGCAATCAgcg > 2:185524/1‑77 (MQ=255) gCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCAc < 1:829453/157‑1 (MQ=255) tGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCg > 1:863290/1‑98 (MQ=255) tGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAg < 1:1035440/222‑1 (MQ=255) tGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCACCGTGCAATCAGCGCATTTTCCGCGCTGGGCCCCAGGCgg > 2:367355/1‑99 (MQ=255) cgGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAg < 2:1488514/216‑1 (MQ=255) gCATTCTTCCGGCAGGTCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAACCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCg < 1:1268208/229‑1 (MQ=255) cATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCCAGCGGCGGtt > 1:686085/1‑221 (MQ=255) aTTCTTCCGGCAGGCCGACCTTGCCCAGCGGGCCTTGCTGGCGGTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCgg < 1:118368/89‑1 (MQ=255) | CGGGCGACGGCAGTTGTAGCTCGGGTCGAGGAGGAAATACTCCATGTTGACCGCGATGTATTCCTTGGGGCTGCTCAACTCATAGCTGTCGGGGCTGCGCACGAATTGGCCATTGTGCTGTTCGCGCTCGCCTCGTCGGCCCACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCG > AE015451/159684‑160131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |