Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | AE015451 | 213,478 | T→C | 7.7% | I6328I (ATT→ATC) | PP_0168 → | putative surface adhesion protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AE015451 | 213,478 | 0 | T | C | 7.7% | 344.8 / 3.6 | 106 | I6328I (ATT→ATC) | PP_0168 | putative surface adhesion protein |
Reads supporting (aligned to +/- strand): ref base T (46/51); new base C (5/4); total (51/55) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.35e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 106 total aligned reads displayed.
AAGGCGACTTGGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCA > AE015451/213249‑213710 | aaGGCGACTTGGTCAAGGTCCCCCTCACGGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAACCCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCg < 1:372611/236‑1 (MQ=255) gccTTGGTCAAGGTCACCATCACGGCCGACCAGACCGCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGt < 1:438413/234‑1 (MQ=255) gACTTGGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCa < 2:856907/234‑1 (MQ=255) ggTCACCATCACGGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTg < 1:76664/236‑1 (MQ=255) gcaccaccacGCCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCGCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACg < 2:304737/227‑1 (MQ=255) cACGGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCgg > 1:171308/1‑212 (MQ=255) ggCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCtt < 2:924485/234‑1 (MQ=255) cAGACCTCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAAc > 2:1490081/1‑234 (MQ=255) agaACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCg < 1:610333/213‑1 (MQ=255) agaACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCg > 2:610331/1‑213 (MQ=255) cGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGggcg < 1:1365239/227‑1 (MQ=255) cGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCaa < 1:567399/236‑1 (MQ=255) tCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTgg > 2:545183/1‑184 (MQ=255) tCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTg > 2:1303734/1‑233 (MQ=255) cTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCACTAATTCGGCAGTGGACGCCACTGGCGCGACCtt > 1:208181/1‑171 (MQ=255) tGGCTCACGACCTGGTCGTGACCCTGCGCAACAATGCCCAGGTCATCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGATGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCCGGGCATCAATTCg > 2:1081770/1‑143 (MQ=11) tGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGggcgg > 2:895317/1‑190 (MQ=255) tGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACCGGTGCTACCTTCGAGAACCTgg > 2:864747/1‑179 (MQ=255) tGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGC‑‑TGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGGCCTTCg > 2:1070507/1‑169 (MQ=255) gCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCaa < 1:1490084/236‑1 (MQ=255) ccTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACt > 2:1210994/1‑148 (MQ=255) ccTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACttg > 2:317376/1‑174 (MQ=255) tCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGAcc < 1:212813/236‑1 (MQ=255) cccTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACcgacga < 1:977979/205‑1 (MQ=255) cTGAGCAACAATGCCCAGGTCATCAGCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACcgcg < 1:89846/225‑1 (MQ=255) gCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGAct > 2:1058448/1‑235 (MQ=255) caacaaTGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGggcg > 2:642225/1‑161 (MQ=255) caacaaTGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGAcaccca > 1:297950/1‑190 (MQ=255) caacaaTGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCACGTTGACCGCGACCCCGTCGGCGACCg > 1:390261/1‑236 (MQ=255) caacaaTGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCg > 1:257335/1‑236 (MQ=255) aaTGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAgg < 1:1197070/236‑1 (MQ=255) aaTGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAgg < 1:1176185/236‑1 (MQ=255) tGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAggcg > 1:1410382/1‑236 (MQ=255) ccAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGa > 2:698233/1‑173 (MQ=255) ccAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAggcggc < 2:1411882/235‑1 (MQ=255) ccAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAggcggc < 1:602846/235‑1 (MQ=255) aGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGAGCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGGGACCGAAgca > 1:323270/1‑228 (MQ=255) aGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAgg < 1:231743/229‑1 (MQ=255) aGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCgag < 1:890384/236‑1 (MQ=255) atcatcaAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTAc > 1:552618/1‑236 (MQ=255) gatcaAGGCTGGCGCAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGACGCCGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTggg < 2:274687/140‑1 (MQ=14) atcaAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACcg < 1:115992/175‑1 (MQ=255) ccaAGGCTGGCGAAACCAGCGCGCCATACACCCACGCCGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCAGTAGACGCCACCGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCGACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGgcggcg < 2:1271499/224‑1 (MQ=11) cTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATc < 1:426807/236‑1 (MQ=255) gCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACg < 1:865396/236‑1 (MQ=255) gAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGGAGTGGCCAAGtt > 2:667627/1‑182 (MQ=255) aaaCCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCt > 2:1124606/1‑235 (MQ=255) aaCCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCgag > 2:1155624/1‑214 (MQ=255) ccAGCGCGCCATACACCCACGCTGCGCAGGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTGCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGAcc < 1:625937/236‑1 (MQ=255) aGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACg < 1:77339/130‑1 (MQ=255) aGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCg > 1:188018/1‑192 (MQ=255) cgcgcCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACcaa < 1:696288/234‑1 (MQ=255) gcCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCAGTGGACGCCACCGGTGCGACCTTCGAGAACCTGCAACTGggcgg > 2:52963/1‑120 (MQ=255) acacCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCT‑GGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATGACGCTGACCAACAACGACGGc > 1:802848/1‑235 (MQ=255) ccACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAgg < 2:21813/189‑1 (MQ=255) ccACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGc < 1:249219/236‑1 (MQ=255) cACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTAc < 1:1073760/200‑1 (MQ=255) aCGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGt < 1:372159/67‑1 (MQ=255) cGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCgag > 2:1216586/1‑193 (MQ=255) tGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCa > 2:349988/1‑206 (MQ=255) tGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACTGCGACCCCGTCGGTGACCGAAGGCGGTGAGAtca > 1:898008/1‑192 (MQ=255) tGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCACTTCGGCAGTGGACGCCACCGGTGGGACCTTCGAGAACCTGGAACTGggc > 1:895373/1‑103 (MQ=14) gcgcAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATcaa < 1:1124609/236‑1 (MQ=255) cagcAGGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGgcggcg < 1:152459/185‑1 (MQ=255) cgcAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATcaa < 1:698235/235‑1 (MQ=255) cAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATcaa < 1:895319/233‑1 (MQ=255) aaGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCgc > 2:952998/1‑164 (MQ=255) aaGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCaacaac < 1:96132/236‑1 (MQ=255) aaGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCAGTGGACGTGAATGGTGGGACCTTCGAGAACCTGGAACTGGGCGGCGACGCTTCGGTCCAAGTGACCGACACCCTcgacg > 2:1271266/1‑135 (MQ=14) aGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAAcc < 1:1467545/236‑1 (MQ=255) ggCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCaacaac < 2:1294849/234‑1 (MQ=255) ggtGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGt < 2:1133249/51‑1 (MQ=255) aTGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCACGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGa > 1:76034/1‑201 (MQ=255) cGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGTCCACCAAAGACGGCCTGcc > 1:81355/1‑216 (MQ=255) cGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCAt > 1:1276156/1‑236 (MQ=255) tACAACGATGCTGGCCAGATCCGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGc < 2:187145/190‑1 (MQ=255) aCAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGa > 2:604046/1‑234 (MQ=255) cAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAGCTGGGCGGCGACGCCACGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCCACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGAc < 1:353629/234‑1 (MQ=11) aaCGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGAcc > 1:595165/1‑234 (MQ=255) aCGATGCTGGCCAGATCAGCCTGGGCATTAAGTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCaacaac < 1:42855/218‑1 (MQ=255) cgggCCAGATCAGCCTGGGGATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGTCGAAGTAGTGACCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATc > 1:789400/3‑176 (MQ=255) cTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTg < 1:604048/236‑1 (MQ=255) tGGCCAGATCAGCCTGGGTATTAATTCGGCGGTGGACGCCCATGGTGCGACCTTCGAGAACCTGGAACTGGGCGGCAACGCTTAGGTGCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGc < 1:470732/219‑1 (MQ=255) tGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGggcg > 2:1342964/1‑74 (MQ=255) tGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGa > 2:1191723/1‑182 (MQ=255) ggCGAGACCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTg < 2:848241/43‑1 (MQ=255) gCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGa > 1:262058/1‑148 (MQ=255) gCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAg < 1:1216589/235‑1 (MQ=255) gCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGc > 1:162645/1‑236 (MQ=255) gCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTGGACCGCGACCCCGTc > 2:1485889/1‑139 (MQ=255) gCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAg < 1:1448367/235‑1 (MQ=255) cAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGAcc > 2:756613/1‑222 (MQ=255) cAGATCAGCCTGGGCAGTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCTAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTAc < 1:798054/161‑1 (MQ=255) aGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAATACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCa > 1:476715/1‑225 (MQ=255) tgCCTGGGCATTAAGTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTTCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTAc < 2:767227/154‑1 (MQ=255) cTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAAc < 1:1058451/236‑1 (MQ=255) gggCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGggcg > 2:920350/1‑59 (MQ=255) gggCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGAAACTggg > 1:1373630/1‑57 (MQ=255) cATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGc < 1:77285/226‑1 (MQ=255) aTTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGtca > 1:886425/1‑235 (MQ=255) | AAGGCGACTTGGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACGTTCACCGTGCACATCAACACCGCCTTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTCGGCAGTGGACGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGTTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCA > AE015451/213249‑213710 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |