New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 404185	52 (0.760)	5 (0.080)	5/316	NT	9.0%	coding (1872/2691 nt)	PP_0337	Sensory box protein
	?	AE015451	= 404192	52 (0.810)					coding (1865/2691 nt)	PP_0337	Sensory box protein

ATAGGGATGATCAGGCCGGTTTCCTCGGCCACGCTGATGAACTGGTCCGGGCGGATCATGCCGCGTTCGGGGTGGTTCCAGCGCAGCAGCGCTTCCAGGCCCAGCAGGCGACCGCTGCGCAGGCACAGCTTGGGCTGGTAGAACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCGGTAAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/403949‑404185 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtaaacaccAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGCTACAAGCTGTTCGTCGAGAACAACCTGCGCCGTGCCCTGACCCAGAACGAGCTGGACGTGTTCTACCAGCCCAAGCTGTGCCTGCGCAGCGGTCGCCTGCTGGGCCTGGAAGCGCTGCTGCGCTGGAACCACCCCGAACGCGGCATGATCCGCCCGGACCAGTTCATCAGCGTGGCCGAGGAAACCGGCC  <  AE015451/404192‑403962                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATAGGGATGATCAGGCCGGTTTCCTCGGCCACGCTGATGAACTGGTCCGGGCGGATCATGCCGCGTTCGGGGTGGTTCCAGCGCAGCAGCGCTTCCAGGCCCAGCAGGCGACCGCTGCGCAGGCACAGCTTGGGCTGGTAGAACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTTGGCGTTGAGCACTTCGGTAAACA                                                                                                                                                                                                                                           <  1:628907/235‑1                                     ATGAACTGGTCCGGGCGGATCATGCCGCGTTCGGGGTGGTTCCAGCGCAGCAGCGCTTCCAGGCCCAGCAGGCGACCGCTGCGCAGGCACAGCTTGGGCTGGTAGAACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCGGTAAAC                                                                                                                                                                                                                                            <  1:668489/198‑1                                                CGGGCGGATCATGCCGCGTTCGGGGTGGTTCCAGCGCAGCAGCGCTTCCAGGCCCAGCAGGCGACCGCTGCGCAGGCACAGCTTGGGCTGGTAGAACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCG                                                                                                                                                                                                                                                  <  1:829150/181‑1                                                CGGGCGGATCATGCCGCGTTCGGGGTGGTTCCAGCGCAGCAGCGCTTCCAGGCCCAGCAGGCGACCGCTGCGCAGGCACAGCTTGGGCTGGTAGAACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCG                                                                                                                                                                                                                                                  >  2:829147/1‑181                                                                  TTCGGGGTGGTTCCAGCGCAGCAGCGCTTCCAGGCCCAGCAGGCGACCGCTGCGCAGGCACAGCTTGGGCTGGTAGAACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCG                                                                                                                                                                                                                                                  <  2:127815/163‑1                                                                           GTTCCAGCGCAGCAGCGCTTCCAGGCCCAGCAGGCGACCGCTGCGCAGGCACAGCTTGGGCTGGTAGAACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCG                                                                                                                                                                                                                                                  <  1:64467/154‑1                                                                                                                            cgcgGCTTGGGCTGGTAGAACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCGGTAAAC                                                                                                                                                                                                                                            <  2:189806/107‑1                                                                                                                                              AACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCGGTAAACACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGA                                                                                                                                                                                                       >  1:1194786/1‑130                                                                                                                                              AACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCGGTAAACACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGA                                                                                                                                                                                                       <  2:1194783/130‑1                                                                                                                                                                                            CGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCGGTAAACACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGATACAAGCTGTTCGTCGAGAACAACCTGCGC                                                                                                                                                                  >  2:496508/1‑121                                                                                                                                                                                             GACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCGGTAAACACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGCTACAAGCTGTTCGTCGAGAACAACCTGCGCCGTGCCCTGACCCAGAACGAGCTGGACGTGTTCTACCAGCCCAAGCTGTGCCTGCGCAGCGGTCGCCTGCTGGGCCTGGAAGCGCTGCTGCGCTGGAACCACCCCGAACGCGGCAT                                              <  1:628429/236‑1                                                                                                                                                                                                     GCTTGTAGCTGGCTTCGGCGTTGAGCACTTCGGTAAACACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGCTACAAGCTGTTCGTCGAGAACAACCTGCGCCGTGCCCTGACCCAGAACGAGCTGGACGTGCTCTACCAGCCCAAGCTGTGCCTGCGCAGCGGTCGCCTGCTGGGCCTGGAAGCGCTGCTGCGCTGGt                                                                 >  2:628426/1‑208                                                                                                                                                                                                                                      TAAACACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGCTACAAGCTGTTCGTCGAGAACAACCTGCGCCGTGCCCTGACCCAGAACGAGCTGGACGTGTTCTACCAGCCCAAGCTGTGCCTGCGCAGCGGTCGCCTGCTGGGCCTGGAAGCGCTGCTGCGCTGGAACCACCCCGAACGCGGCATGATCCGCCCGGACCAGTTCATCAGCGTGGCCGAGGAAACCG     >  1:1107458/1‑236                                                                                                                                                                                                                                      TAAACACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGCTACAAGCTGTTCGTCGAGAACAACCTGCGCCGTGCCCTGACCCAGAACGAGCTGGACGTGTTCTACCAGCCCAAGCTGTGCCTGCGCAGCGGTCGCCTGCTGGGCCTGGAAGCGCTGCTGCGCTGGAACCACCCCGAACGCGGCATGATCCGCCCGGACCAGTTCATCAGCGTGGCCGAGGAAACC      >  1:980883/1‑235                                                                                                                                                                                                                                      TAAACACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGCTACAAGCTGTTCGTCGAGAACAACCTGCGCCGTGCCCTGACCCAGAACGAGCTGGACGTGTTCTACCAGCCCAAGCTGTGCCTGCGCAGCGGTCGCCTGCTGGGCCTGGAAGCGCTGCTGCGCTGGAACCACCCCGAACGCGGCATGATCCGCCCGGACCAGTTCATCAGCGTGGCCGAGGAAAC       >  1:1028003/1‑234                                                                                                                                                                                                                                         ACACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGCTACAAGCTGTTCGTCGAGAACAACCTGCGCCGTGCCCTGACCCAGAACGAGCTGGACGTGTTCTACCAGCCCAAGCTGTGCCTGCGCAGCGGTCGCCTGCTGGGCCTGGAAGCGCTGCTGCGCTGGAACCACCCCGAACGCGGCATGATCCGCCCGGACCAGTTCATCAGCGTGGCCGAGGAAACCGGCC  <  1:819282/236‑1                                                                                                                                                                                                                                           ACCAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGCTACAAGCTGTTCGTCGAGAACAACCTGCGCCGTGCCCTGACCCAGAACGAGCTGGACGTGTTCTACCAGCCCAAGCTGTGCCTGCGCAGCGGTCGCCTGCTGGGCCTGGAAGCGCTGCTGCGCTGGAACCACCCCGAACGCGGCATGATCCGCCCGGACCc                               >  2:674593/1‑204                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATAGGGATGATCAGGCCGGTTTCCTCGGCCACGCTGATGAACTGGTCCGGGCGGATCATGCCGCGTTCGGGGTGGTTCCAGCGCAGCAGCGCTTCCAGGCCCAGCAGGCGACCGCTGCGCAGGCACAGCTTGGGCTGGTAGAACACGTCCAGCTCGTTCTGGGTCAGGGCACGGCGCAGGTTGTTCTCGACGAACAGCTTGTAGCTGGCTTCGGCGTTGAGCACTTCGGTAAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/403949‑404185 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtaaacaccAGGTACAGGTGTTTACCGAAGTGCTCAACGCCGAAGCCAGCTACAAGCTGTTCGTCGAGAACAACCTGCGCCGTGCCCTGACCCAGAACGAGCTGGACGTGTTCTACCAGCCCAAGCTGTGCCTGCGCAGCGGTCGCCTGCTGGGCCTGGAAGCGCTGCTGCGCTGGAACCACCCCGAACGCGGCATGATCCGCCCGGACCAGTTCATCAGCGTGGCCGAGGAAACCGGCC  <  AE015451/404192‑403962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.