New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	779909 =	85 (1.240)	5 (0.080)	4/322	NT	5.8%	coding (562/954 nt)	PP_0670	Transporter, bile acid/Na+ symporter family
	?	AE015451	779928 =	80 (1.220)					coding (543/954 nt)	PP_0670	Transporter, bile acid/Na+ symporter family

TGCATCGACTACGTGGTGGTGTTCACCCACATTGGCAAAGGCGACTCACGCCTGACCCTGTCCGCAACCCCCCTGTTATTGCTGGCGCAACTGGTGCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAGCAGCCAGGTGGCAATCTCCATCACCCCGTTCCTGGAAGCCTTCGTGCTGTTGATCGTGTTGCCGATGGCCCTCGCGGTGCTCACCAGCGCCGGTGCCCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/780146‑779909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgctGGTGAGCACCGCGAGGGCCATCGGCAACACGATCAACAGCACGAAGGCTTCCAGGAACGGGGTGATGGAGATTGCCACCTGGCTGCTGCCACCCAGCATCAGGGCCAGGTACACCGGCAGCAGCACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTGCCAATGTGGGTGAACACCACCACGTAGTCGA  >  AE015451/779928‑780142                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCATCGACTACGTGGTGGTGTTCACCCACATTGGCAAAGGCGACTCACGCCTGACCCTGTCCGCAACCCCCCTGTTATTGCTGGCGCAACTGGTGCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAGCAGCCAGGTGGCAATCTCCATCACCCCGTTCCTGGAAGCCTTCGTGCTGTTGATCGTGTTGCCGATGGCCCTCGCGGTGCTCACCAGCGCCGGTGCCCG                                                                                                                                                                                                                              <  1:1217644/233‑1       GACTACGTGGTGGTGTTCACCCACATTGGCAAAGGCGACTCACGCCTGACCCTGTCCGCAACCCCCCTGTTATTGCTGGCGCAACTGGTGCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAGCAGCCAGGTGGCAATCTCCATCACCCCGTTCCTGGAAGCCTTCGTGCTGTTGATCGTGTTGCCGATGGCCCTCGCGGTGCTCACCAGCGCCGGTGCCCGGCGCTGGT                                                                                                                                                                                                                      <  1:527869/235‑1                         ACCCACATTGGCAAAGGCGACTCACGCCTGACCCTGTCCGCAACCCCCCTGTTATTGCTGGCGCAACTGGTGCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAGCAGCCAGGTGGCAATCTCCATCACCCCGTTCCTGGAAGCCTTCGTGCTGTTGATCGTGTTGCCGATGGCCCTCGCGGTGCTCACCAGCGCCGGTGCCCGGCG                                                                                                                                                                                                                           >  1:1229282/1‑212                                                                                                         GGTGGACCTGGCCCTGATGCTGGGTGGCAGCAGCCAGGTGGCAATCTCCATCACCCCGTTCCTGGAAGCCTTCGTGCTGTTGAGCGTGTTGCCGATGGCCCTCGCGGTGCTCACCAGCGCCGGTGCCCGGCGC                                                                                                                                                                                                                          <  2:51977/133‑1                                                                                                                                        AGCCCGGTGGCAATCCCCATCACCCCCTGCCTGGCAGCCTTCGTGCTGTTGATCGTGTTGCCGATGGCCCTCGCGGTGCTCACCAGCGCCGGTGCCCGGCGCTGGTGAGCACCGCGAGGGCCATCGGCAACACGATC                                                                                                                                                                                       <  1:918153/137‑1                                                                                                                                                       TCCATCACCCCGTTCCTGGAAGCCTTCGTGCTGTTGATCGTGTTGCCGATGGCCCTCGCGGTGCTCACCAGCGCCGGTGCCCGGCGCTGGTGAGCACCGCGAGGGCCATCGGCAACACGATCAACAGCACGAAGGCTTCCAGGA                                                                                                                                                                 <  2:523079/144‑1                                                                                                                                                                      CTGGAAGCCTGCGGGCTGTTGATCGTGTTGCCGATGGCCCTCGCGGTGCTCCCCAGCGCCGGTGCCCGGCGCGGGTGAGCACCGCGAGGGCCATCGGCAACACGATCAACAGCACGAAGGCTTCCAG                                                                                                                                                                   <  2:116692/127‑1                                                                                                                                                                           AGCCTTCGTGCTGTTGATCGTGTTGCCGATGGCCCTCGCGGTGCTCACCAGCGCCGGTGCCCGGCGCTGGTGAGCACCGCGAGGGCCATCGGCAACACGATC                                                                                                                                                                                       <  1:352668/102‑1                                                                                                                                                                                                                               GCCGGTGCCCGGCGCTGGTGAGCACCGCGAGGGCCATCGGCAACACGATCAACAGCACGAAGGCTTCCAGGAA                                                                                                                                                                <  2:1229279/73‑1                                                                                                                                                                                                                                        CGGCGCTGGTGAGCACCGCGAGGGCCATCGGCAACACGATCAACAGCACGAAGGCTTCCAGGAACGGGGTGATGGAGATTGCCACCTGGCTGCTGCCACCCAGCATCAGGGCCAGGTACACCGGCAGCAGCACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTGCCAATGTGGGTGAACACCACCACGTAGTCGA  <  1:193035/222‑1                                                                                                                                                                                                                                        CGGCGCTGGTGAGCACCGCGAGGGCCATCGGCAACACGATCAACAGCACGAAGGCTTCCA                                                                                                                                                                    <  2:592841/60‑1                                                                                                                                                                                                                                         GGCGCTGGTGAGCACCGCGAGGGCCATCGGCAACACGATCAACAGCACGAAGGCTTCCAGGAACGGGGTGATGGAGATTGCCACCTGGCTGCTGCCACCCAGCATCAGGGCCAGGTACACCGGCAGCAGCACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTGCCAATGTGGGTGAACACCAC             <  2:713553/210‑1                                                                                                                                                                                                                                           CGCGGGTGAGCACCGCGAGGGCCATCGGCAACACGATCAACAGCACGAAGGCTTCCAGGAACGGGGTGATGGAGATTGCCACCTGGCTGCTGCCACCCAGCATCAGGGCCAGGTACACCGGC                                                                                                   <  2:307097/122‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCATCGACTACGTGGTGGTGTTCACCCACATTGGCAAAGGCGACTCACGCCTGACCCTGTCCGCAACCCCCCTGTTATTGCTGGCGCAACTGGTGCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAGCAGCCAGGTGGCAATCTCCATCACCCCGTTCCTGGAAGCCTTCGTGCTGTTGATCGTGTTGCCGATGGCCCTCGCGGTGCTCACCAGCGCCGGTGCCCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/780146‑779909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgctGGTGAGCACCGCGAGGGCCATCGGCAACACGATCAACAGCACGAAGGCTTCCAGGAACGGGGTGATGGAGATTGCCACCTGGCTGCTGCCACCCAGCATCAGGGCCAGGTACACCGGCAGCAGCACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTGCCAATGTGGGTGAACACCACCACGTAGTCGA  >  AE015451/779928‑780142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.