New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	844628 =	87 (1.270)	3 (0.050)	3/318	NT	4.1%	coding (215/603 nt)	PP_0727	conserved protein of unknown function
	?	AE015451	844674 =	60 (0.930)					coding (169/603 nt)	PP_0727	conserved protein of unknown function
Rejected: Frequency below/above cutoff threshold.

GCATGATTTTGGTTGGGATGACCATGCTCAGGCAGTTCAACGCCGAACGCCAGGAATGGCGGGACGCGCTCGACCAGCGCTGGGTTGAATTCTTAGACCAATGTGGGCTGACCCCGCTGTACCTTCCAAACGATCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGCCCTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/844844‑844628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccctgagGGCGCAATGATTGGACTAACGCCATGCTGACTCTTGGATCGTTTGGAAGGTACAGCGGGGTCAGCCCACATTGGTCTAAGAATTCAACCCAGCGCTGGTCGAGCGCGTCCCGCCATTCCTGGCGTTCGGCGTTGAACTGCCTGAGCATGGTCATCCCAACCAAAATCATGCCAGCACCTGTATACGCCGCTCGGCGCAGTCGAGCAGCAGGCTTGTCGCCGCCAATAGGGT  >  AE015451/844674‑844904                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCATGATTTTGGTTGGGATGACCATGCTCAGGCAGTTCAACGCCGAACGCCAGGAATGGCGGGACGCGCTCGACCAGCGCTGGGTTGAATTCTTAGACCAATGTGGGCTGACCCCGCTGTACCTTCCAAACGATCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGCCCT                                                                                                                                                                                                                                            >  1:573640/1‑214                             CAGGCAGTTCAACGCCGAACGCCAGGAATGGCGGGACGCGCTCGACCAGCGCTGGGTTGAATTCTTAGACCAATGTGGGCTGACCCCGCTGTACCTTGCAAACGATCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGCCC                                                                                                                                                                                                                                             >  1:1259975/1‑185                              AGGCAGTTCAACGCCGAACGCCAGGAATGGCGGGACGCGCTCGACCAGCGCTGGGTTGAATTCTTAGACCAATGTGGGCTGACCCCGCTGTACCTTCCAAACGATCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGCCCTG                                                                                                                                                                                                                                           >  2:706009/1‑186                                           CCGAACGCCAGGAATGGCGGGACGCGCTCGACCAGCGCTGGGTTGAATTCTTAGACCAATGTGGGCTGACCCCGCTGTACCTTCCAAACGATCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGCCCTGAGGGCGCAATGATTGGACTAACGCCATGCTGACTCTTGGATCGTTTGGAAGGTACAGCGG                                                                                                                                                                               <  2:750891/233‑1                                                                    GCTCGCCCAGCGCTGGGCTGAATTCTTAGGCCAATGTGGGCTGCCCCCGCTGTCCCTTCCAAACGATCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAG                                                                                                                                                                                                                                                 <  2:158743/142‑1                                                                                                             TGACCCCGCTGTACCTTCCAAACGTTCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCCGGGCCTCCTGCTTACCGGGGGAGGTAGTTGCCAGGCCCTGAGGGCGCAATGATTGGACTAACGCCATGCTCACTCTTGGATCGTTT                                                                                                                                                                                             <  1:1074176/153‑1                                                                                                                  CCGCTGTACCTTCCAAACGATCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGC                                                                                                                                                                                                                                               <  1:855150/98‑1                                                                                                                  CCGCTGTACCTTCCAAACGATCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGC                                                                                                                                                                                                                                               >  2:855147/1‑98                                                                                                                                                             TCCAATCATTGCGCCGTCAGGGTCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGCCCTGAGGGCGCAATGATTGGACTAACGCCATGCTGACTCTTGGATCGTTTGGAAGGTACAGCGGGGTCAGCCCACATTGGTCTAAGAATTCA                                                                                                                                                   <  2:657869/147‑1                                                                                                                                                                          CCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGCC                                                                                                                                                                                                                                              >  2:500818/1‑43                                                                                                                                                                                                                     CTGAGGGCGCAATGATTGGACTAACGCCATGCTGACTCTTGGATCGTTTGGAAGGTACAGCGGGGTCAGCCCACATTGGTCTAAGAATTCAACCCAGCGCTGGTCGAGCGCGTCCCGCCATTCCTGGCGTTCGGCGTTGAACTGCCTGAGCATGGTCATCCCAACCAAAATCATGCCAGCACCTGTATACGCCGCTCGGCGCAGTCGAGCAGCAGGCTTGTCGCCGCCAATAGGGT  >  1:1070475/1‑236                                                                                                                                                                                                                     CTGAGGGCGCAATGATTGGACGAACGCCATGCTGACTCTTGGATCGTTTGGAAGGTACAGCGGGGTCAGCCCACATTGGTCTAAGAATTCAACCCAGCGCTGGTCGAGCGCGTCCCGCCATTCCTGGCGTTCGGCGTTGAACTGCCTGAGCATGGTCATCCCAACCAAAATCATGCCAGCACCTGTATACGCCGCTCGGCGCAGTCGAGCAGCAGGCTTGTCGCCGCCAATAGGGT  <  1:983290/236‑1                                                                                                                                                                                                                         GGGCGCAATGATTGGACTAACGCCATGCTGACTCTTGGATCGTTTGGAAGGTACAGCGGGGTCAGCCCACATTGGTCTAAGAATTCAACCCAGCGCTGGTCGAGCGCGTCCCGCCATTCCTGGCGTTCGGCGTTGAACTGCCTGAGCATGGTCATCCCAACCAAA                                                                     >  1:726029/1‑165                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCATGATTTTGGTTGGGATGACCATGCTCAGGCAGTTCAACGCCGAACGCCAGGAATGGCGGGACGCGCTCGACCAGCGCTGGGTTGAATTCTTAGACCAATGTGGGCTGACCCCGCTGTACCTTCCAAACGATCCAAGAGTCAGCATGGCGTTAGTCCAATCATTGCGCCCTCAGGGCCTCCTGCTTACCGGTGGAGGGAGTTGCCAGGCCCTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/844844‑844628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccctgagGGCGCAATGATTGGACTAACGCCATGCTGACTCTTGGATCGTTTGGAAGGTACAGCGGGGTCAGCCCACATTGGTCTAAGAATTCAACCCAGCGCTGGTCGAGCGCGTCCCGCCATTCCTGGCGTTCGGCGTTGAACTGCCTGAGCATGGTCATCCCAACCAAAATCATGCCAGCACCTGTATACGCCGCTCGGCGCAGTCGAGCAGCAGGCTTGTCGCCGCCAATAGGGT  >  AE015451/844674‑844904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.