New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2270395	57 (0.830)	4 (0.060)	3/324	NT	6.6%	coding (1198/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
	?	AE015451	= 2270468	58 (0.880)					coding (63/774 nt)	PP_2002	putative enzyme

GCTTTGAAGTCAAGGGGGGCAAAGAGGGCGCCTGGCGTTTCATCGACGCTACCCGAGTGATTTCCATCACGACCAACCTGGGTGACAGCAAAACCACCATCGCTCATCCGGCGACCACCTCACACGGTCGTCTGTCGCCGCAGGAGCGTGAAGCGGCTGGTATCCGCGACAGCCTGATCCGTGTTGCCGTGGGTCTGGAAGACGTGGCTGACCTGCAGGCTGACCTGGCGCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2270159‑2270395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgggcGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGCCCGCGCGCCAGGTCAGCCTGCAGGTCAGCCACGTCTTCCAGACCCACGGCAACACGGATCAGGCTGTCGCGGATACCAGCCGCTTCACGCTCCTGCGGCGACAGACGACCGTGTGAGGTGGTCGCCGGATGAGCGATGGTGGTTTTGCTGTCAC  <  AE015451/2270468‑2270240                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTTTGAAGTCAAGGGGGGCAAAGAGGGCGCCTGGCGTTTCATCGACGCTACCCGAGTGATTTCCATCACGACCAACCTGGGTGACAGCAAAACCACCATCGCTCATCCGGCGACCACCTCACACGGTCGTCTGTCGCCGCAGGAGCGTGAAGCGGCTGGTATCCGCGACAGCCTGATCCGTGTTGCCGTGGGTCTGGAAGACGTGGCTGACCTGCAGGCTGACCTGGCGCGCG                                                                                                                                                                                                                                          <  1:1038101/234‑1  CTTTGAAGTCAAGGGGGGCAAAGAGGGCGCCTGGCGTTTCATCGACGCTACCCGAGTGATTTCCATCACGACCAACCTGGGTGACAGCAAAACCACCATCGCTCATCCGGCGACCACCTCACACGGTCGTCTGTCGCCGCAGGAGCGTGAAGCGGCTGGTATCCGCGACAGCCTGATCCGTGTTGCCGTGGGTCTGGAAGACGTGGCTGACCTGCAGGCTGACCTGGCGCGCGGGC                                                                                                                                                                                                                                       <  1:180099/236‑1                                                                              CTGGGTGACAGCAAAACCACCATCGCTCATCCGGCGACCACCTCACACGGTCGTCTGTCGCCGCAGGAGCGTGAAGCGGCTGGTATCCGCGACAGCCTGATCCGTGTTGCCGTGGGTCTGGAAGACGTGGCTGACCTGCAGGCTGACCTGGCGCGCGGGCGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGC                                                                                                                                                            <  1:898946/235‑1                                                                                                                  ACCACCTCACACGGTCGTCTGTCGCCGCAGGAGCGTGAAGCGGCTGGTATCCGCGACAGCCTGATCCGTGTTGCCGTGGGTCTGGAAGCCGTGCCTGACCTGCAGGCTGACCTGGCGCGCCGGCcggc                                                                                                                                                                                                                                   >  2:71129/1‑124                                                                                                                       CTCACACGGTCGTCTGTCGCCGCAGGAGCGTGAAGCGGCTGGGATCCGCGACAGCCTGATCCGTGTTGCCGTGGGTCTGGAAGACGTGGCTGGCCTTCAGGCTGCCCTGGCCCGCGGG                                                                                                                                                                                                                                        >  2:190427/1‑118                                                                                                                            gCGGTCGGCTGTCGCCGCAGGAGCGTGAAGCGGCTGGTATCCGCGACAGCCTGATCCGTGTGGCCGTGGGTCTGGAAGACGTGGCTGACCTGCAGGCTGACCTGGCGCGCGGGC                                                                                                                                                                                                                                       <  2:190936/113‑1                                                                                                                                                                                              TGGGTCTGGAAGACGTGGCTGACCTGCAGGCTGACCTGGCGCGCGGGCGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCcg                                                                                                                                                                                   >  1:103728/1‑98                                                                                                                                                                                              TGGGTCTGGAAGACGTGGCTGACCTGCAGGCTGACCTGGCGCGCGGGCGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGCCCGCGCGCCAGGTCAGCCTGCAGGTCAGCCACGTCTTCCAGACCCCCGGCAACA                                                                                                      >  1:935455/1‑177                                                                                                                                                                                                 GTCTGGAAGACGTGGCTGACCTGCAGGCTGACCTGGCGCGCGGGCGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGCCCGCGCGCCAGGTCAG                                                                                                                                            >  2:1078969/1‑136                                                                                                                                                                                                                                       CGCGGGCGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGCCCGCGCGCCAGGTCAGCCTGCAGGTCAGCCACGTCTTCCAGACCCACGGCAACACGGATCAGGCTGTCGCGGATACCAGCCGCTTCACGCTCCTGCGGCGACAGACGACCGTGTGAGGTGGTCGCCGGATGAGCGATGGTGGTTTTGCTGTCAC  >  1:1260549/1‑236                                                                                                                                                                                                                                       CGCGGGCGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGCCCGCGCGCCAGGTCAGCCTGCAGGTCAGCCACGTCTTCCAGACCCACGGCAACACGGATCAGGCTGTCGCGGATACCAGCCGCTTCACGCTCCTGCGGCGACAGACGACCGTGTGAGGTGGTCGCCG                             >  1:1255097/1‑209                                                                                                                                                                                                                                       CGCGGGCGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGCCCGCGCGCCAGGTCAGCCTGCAGGTCAGCCACGTCTTCCAGACCCACGGCAACACGGATCAGGCTGTCGCGGATACCAGCCGCTTCACGCTCCTGCGGCGACAGACGACCGT                                            >  1:1035907/1‑194                                                                                                                                                                                                                                       CGCGGGCGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGCCCGCGCGCCAGGTCAGCCTGCAGGTCAGCCACGTCTTCCAGACCCACGGCAACACGGATCAGGCTGTCGCGGATACCAGCCGCTTCACGCACCTGCGGCGCCAGACGACCGTGTGAGG                                      >  1:206092/1‑200                                                                                                                                                                                                                                             CGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGCCCGCGCGCCAGGTCAGCCTGCAGGTCAGCCACGTCTTCCAGACCCACGGCAACACGGATCAGGCTGTCGCGGATACCAGCCGCTTCACGCTCCTGCGGCGACAGACGACCGTGTGAGGTGGT                                  <  2:442126/198‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTTTGAAGTCAAGGGGGGCAAAGAGGGCGCCTGGCGTTTCATCGACGCTACCCGAGTGATTTCCATCACGACCAACCTGGGTGACAGCAAAACCACCATCGCTCATCCGGCGACCACCTCACACGGTCGTCTGTCGCCGCAGGAGCGTGAAGCGGCTGGTATCCGCGACAGCCTGATCCGTGTTGCCGTGGGTCTGGAAGACGTGGCTGACCTGCAGGCTGACCTGGCGCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2270159‑2270395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgggcGGCGCCCGTGACCAAGGCTACCCGGCCATTGTGGCCCGGGGTGCTGCCGCTGATTTCGATCACAATGCCGCCAGCCCGCGCGCCAGGTCAGCCTGCAGGTCAGCCACGTCTTCCAGACCCACGGCAACACGGATCAGGCTGTCGCGGATACCAGCCGCTTCACGCTCCTGCGGCGACAGACGACCGTGTGAGGTGGTCGCCGGATGAGCGATGGTGGTTTTGCTGTCAC  <  AE015451/2270468‑2270240

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.