New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2310292 =	56 (0.820)	5 (0.080)	5/318	NT	9.0%	coding (43/1311 nt)	PP_2033	conserved protein of unknown function
	?	AE015451	2310373 =	48 (0.740)					coding (124/1311 nt)	PP_2033	conserved protein of unknown function

ACGCCTTCCACATAGCGCTTCAAGAACGCCTGCGGCCCGTCGGCACCGGCAGCATCAGCCGGATACAACGCATGCAACAGGGCCACATTGCTCAAGGCGTTGCCATAGCTGCCACCCTTGTCACCCTGCTCACCCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2310491‑2310292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagggtgacAAGGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCATGCGTTGTATCCGGCTGATGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAA  >  AE015451/2310373‑2310600                                                                                                                                                                                                                                                                                                                                                                                                                                              cCGCCTTCCACATAGCGCTTCAAGAACGCCTGCGGCACGTCGGCACCGGCAGCATCAGCCGGATACAACGCATGCAACAGGGCCACATTGCTCAAGGCGTTGCCATAGCTGCCACCCTTGTCACCCTGCTCACCCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGG                                                                                                                                                                                                                                          <  1:247446/195‑1                      acgagCGCCTGCGGCCCGTCGGCACCGGCAGCATCAGCCGGATAC‑ACGCATGCAACAGGGCCACATTGCTCAAGGCGTTGCCATAGCTGCCACCCGTGTCACCCTGCTCACCCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGG                                                                                                                                                                                                                                          <  1:598516/169‑1                                                                                                                   CCCTTGTCAGCCTGCTCACCCTCCGCCGTGGCATTGTGCAGGTTGTGTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGG                                                                                                                                                                                                                                          <  2:5775/82‑1                                                                                                                   CCCTTGCCACCCTGCTCACCCACCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGG                                                                                                                                                                                                                                          <  2:236030/82‑1                                                                                                                                 CTCACCCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAG                                                                                                                                                                                                                                            >  2:864519/1‑66                                                                                                                                           GCCGTGGCATTGTGCAGGCTGTTTCCGGTGCCATCGAAGAACACGCCAAAACG                                                                                                                                                                                                                                               <  1:943566/53‑1                                                                                                                                             CGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACAAGGGTGGCAGCTATGGC                                                                                                                                                                                                                    <  1:983094/78‑1                                                                                                                                             CGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACAAGGGTGGCAGCTATGGC                                                                                                                                                                                                                    >  2:983091/1‑78                                                                                                                                                   ATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACAAGGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCATGCGTTGTATCCGGCTGATGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCG                                                                                        >  2:1163005/1‑196                                                                                                                                                            GTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGG                                                                                                                                                                                                                                          <  1:420652/41‑1                                                                                                                                                               GTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACAAGGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCATGCGTTGTATCCGGCTGATGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGG                                                         <  1:1172617/215‑1                                                                                                                                                               GTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACAAGGGTGGCAGCTATGGCAACGCCTGGAGCAATGTGGCCCTGTTGCATGCGTTGTATCCGGCTGATGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGG                                                         >  2:1172614/1‑215                                                                                                                                                                                                CAGGGGGACAAGGGTGGCAGCTATGGCAACGCCTTGCGCAATGTGGCCCTGTTGCATGCGTTGTATCCGGCTGATGCTGCCGGTGCCGACGGGCCGCcg                                                                                                                                            >  2:107398/1‑97                                                                                                                                                                                                  GGGTGACAAGGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCATGCGTTGTATCCGGCTGATGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAA  <  1:417441/235‑1                                                                                                                                                                                                       ACAAGGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCATGCGTTGTATCCGGCTGATGCTGCCGGTGCCGA                                                                                                                                                      >  2:1067640/1‑82                                                                                                                                                                                                                                                                                                                                                                                                                                              ACGCCTTCCACATAGCGCTTCAAGAACGCCTGCGGCCCGTCGGCACCGGCAGCATCAGCCGGATACAACGCATGCAACAGGGCCACATTGCTCAAGGCGTTGCCATAGCTGCCACCCTTGTCACCCTGCTCACCCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2310491‑2310292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagggtgacAAGGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCATGCGTTGTATCCGGCTGATGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAA  >  AE015451/2310373‑2310600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.