New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 2909022 = | 87 (1.270) | 7 (0.110) | 6/320 | NT | 8.1% | coding (1416/1737 nt) | aprDA | alkaline protease secretion transporter ATP‑binding protein |
? | AE015451 | 2909058 = | 77 (1.190) | coding (1380/1737 nt) | aprDA | alkaline protease secretion transporter ATP‑binding protein |
GCCGCAGGACGTGGAGCTGTTCGAAGGCACCATCGCCGAAAACATCGCCCGCTTTGCCGAGGTGGACAGCGACGCGGTGATCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2909205‑2909022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggccagGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAGGTGAAGATATCGGCGCCGTCCAGGCGCACCTTGCCGGCCTGGGCCGG > AE015451/2909058‑2909291 GCCGCAGGACGTGGAGCTGTTCGAAGGCACCATCGCCGAAAACATCGCCCGCTTTGCCGAGGTGGACAGCGACGCGGTGATCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGC < 1:414393/210‑1 TCGCCGAAAACATCGCCCGCTTTGCCGAGGTGGACAGCGACGCGGTGATCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCtgtc > 1:29947/1‑186 cGATCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGC < 2:1273616/125‑1 TCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTCCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGT < 1:408970/145‑1 CGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCC > 2:273103/1‑100 CTGCGCGTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTACCCCTGCGGGAAGCGCAGGATC < 2:560805/100‑1 CCGCCTGGCCGCCGATGGCGGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCT < 2:160358/91‑1 CCTGGCCGCCGATGGCAGCCCATTGTCTAGCGGCCAGGCGGGTGTCGTAACCCTGC < 2:29947/56‑1 GGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAGGTGAAGATATCGGCGCCGTCCAGGC < 1:185396/221‑1 GCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAGGTGAAGATATCGGCGCCGTCCAGGCGCACCTTGCCGGCCTG < 1:1241891/236‑1 AGGCGGGTGTCGGAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAGGTGAAGATATCGGCGCCGTCCAGGCGCACCTTGCCGGCCTGGGCCGG < 1:85275/236‑1 GCCGCAGGACGTGGAGCTGTTCGAAGGCACCATCGCCGAAAACATCGCCCGCTTTGCCGAGGTGGACAGCGACGCGGTGATCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2909205‑2909022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggccagGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAGGTGAAGATATCGGCGCCGTCCAGGCGCACCTTGCCGGCCTGGGCCGG > AE015451/2909058‑2909291 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |