New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3685837 =	58 (0.840)	4 (0.060)	4/324	NT	6.5%	coding (245/1332 nt)	PP_3251	conserved protein of unknown function
	?	AE015451	3685864 =	60 (0.910)					coding (272/1332 nt)	PP_3251	conserved protein of unknown function

CACCGTTGCCGAGCTCTTCCAGATAGGTGCGAATCAGCCCGTGGTAACGCGGATCGCGCCAGTGATGCAGGGTGCCCTGTAGCCAGGCGCCATCCACGGCCTTGGTAGGCGCAACCTGTTGCAGGAACCACAATGCGTGGGCGCGGTTGGAAAAGTAACGCCGGGGCATACCTTGACGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3686019‑3685837 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgttACTTTTCCAACCGCGCCCACGCATTGTGGTTCCTGCAACAGGTTGCGCCTACCAAGGCCGTGGATGGCGCCTGGCTACAGGGCACCCTGCATCACTGGCGCGATCCGCGTTACCACGGGCTGATTCGCACCTATCTGGAAGAGCTCGGCAACGGTGATCCACGCTGCAACCATGTGCTGATCTATCAGCGCCTGCTTGCTCGCCTGGGTTGCGTAGAGGCCATGCCCCT  >  AE015451/3685864‑3686092                                                                                                                                                                                                                                                                                                                                                                                                                              CACCGTTGCCGAGCTCTTCCAGATAGGTGCGAATCAGCCCGTGGTAACGCGGATCGCGCCAGTGATGCAGGGTGCCCTGTAGCCAGGCGCCATCCACGGCCTTGGTAGGCGCAACCTGTTGCAGGAACCACAATGCGTGGGCGCGGTTGGAAAAGTAACGCCGGGGCATACCTTGACGGC                                                                                                                                                                                                                                          <  1:747375/180‑1 CACCGTTGCCGAGCTCTTCCAGATAGGTGCGAATCAGCCCGTGGTAACGCGGATCGCGCCAGTGATGCAGGGTGCCCTGTAGCCAGGCGCCATCCACGGCCTTGGTAGGCGCAACCTGTTGCAGGAACCACAATGCGTGGGCGCGGTTGGAAAAGTAACGCCGGGGCATACCTTGACGGC                                                                                                                                                                                                                                          >  2:747372/1‑180    CGTTGCCGCGCTCTTCCTGAGAGGTGCGAATCAGCCCGTGGTAACGCGGATCGCGCCAGTGATGCAGGGTGCCCTGTAGCCAGGCGCCATCCACGGCCTTGGTAGGCGCAACCTGTTGCAGGAACCACAATGCGTGGGCGCGGTTGGAAAAGTAACGCCGGGGCATACCTTGACGGCGT                                                                                                                                                                                                                                        <  2:384734/179‑1         CCGAGCTCTTCCAGATAGGTGCGAATCAGCCCGTGGTAACGCGGATCGCGCCAGTGATGCAGGGTGCCCTGTAGCCAGGCGCCATCCACGGCCTTGGTAGGCGCAACCTGTTGCAGGAACCACAATGCGTGGGCGCGGTTGGAAAAGTAACGCCGGGGCATACCTTGACGGCGTTACTTTTCCAACCGCGCCCACGCATTGTGGTTCCTGCAACAGGTTTCGCCTACCctgtctct                                                                                                                                                                          >  1:636032/1‑228                                      CCCGTGGTAACGCGGATCGCGCCAGTGATGCAGGGTGCCCTGTAGCCAGGCGCCATCCACGGCCTTGGTAGGCGCAACCTGTTGCAGGAACCACAATGCGTGGGCGCGGTTGGAAAAGTAACGCCGGGGCATACCTTGACGGCGTTACTTTTCCAACCGCGCCCACGCATTGTGGTTCCTGCAAC                                                                                                                                                                                                <  2:636029/185‑1                                                                GATGCAGGGTGCCCTGTAGCCAGGCGCCATCCACGGCCTTGGTAGGCGCAACCTGTTGCAGGAACCACAATGCGTGGGCGCGGTTGGAAAAGTACCGCCGGGGCATACCTTGACGGCGTTACTTTTCCAACCGCGCCCACGCATTGTGGTTCCTGCAACAGGTT                                                                                                                                                                                           <  2:971621/164‑1                                                                                               CACGGCCTTGGTAGGCGCAACCTGTTGCAGGAACCACAATGCGTGGGCGCGGTTGGAAAAGTAACGCCGGGGCATACCTTGACGGCGTTACTTTTCCAACCGCGCCCACGCATTGTGGTTCCTGCAACAGGTTGCGCCTACCAAGGCCGTGGATG                                                                                                                                                                     <  2:623292/155‑1                                                                                                                                                                                 CGGCGTTACTTTTCCAACCGCGCCCACGCATTGTGGTTCCTGCAACAGGTTGCGCCTACCAAGGCCGTGGATGGCGCCTGGCTACAGGGCACCCTGCATCACTGGCGCGATCCGCGTTACCACGGGCTGATTCGCACCTATCTGGAAGAGCTCGGCAACGGTGATCCACGCTGCAACCATGTGCTGATCTATCAGCGCCTGCTTGCTCGCCTGGGTTGCGTAGAGGCCATGCCCCT  >  1:126567/1‑236                                                                                                                                                                                  GGCGTCACTTTTCCACCCGCGCCCCCGCATTGTGGTTCCTGCAACAGGTTGCGCCTACCAAGGCCGTGGATGGCGCCTGGCTACA                                                                                                                                                        <  2:1046402/85‑1                                                                                                                                                                                                                                                                                                                                                                                                                              CACCGTTGCCGAGCTCTTCCAGATAGGTGCGAATCAGCCCGTGGTAACGCGGATCGCGCCAGTGATGCAGGGTGCCCTGTAGCCAGGCGCCATCCACGGCCTTGGTAGGCGCAACCTGTTGCAGGAACCACAATGCGTGGGCGCGGTTGGAAAAGTAACGCCGGGGCATACCTTGACGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3686019‑3685837 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgttACTTTTCCAACCGCGCCCACGCATTGTGGTTCCTGCAACAGGTTGCGCCTACCAAGGCCGTGGATGGCGCCTGGCTACAGGGCACCCTGCATCACTGGCGCGATCCGCGTTACCACGGGCTGATTCGCACCTATCTGGAAGAGCTCGGCAACGGTGATCCACGCTGCAACCATGTGCTGATCTATCAGCGCCTGCTTGCTCGCCTGGGTTGCGTAGAGGCCATGCCCCT  >  AE015451/3685864‑3686092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.