New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 3894290 = | 62 (0.900) | 5 (0.070) | 5/332 | NT | 7.8% | coding (769/1572 nt) | yegH | putative transporter |
? | AE015451 | 3894356 = | 58 (0.860) | coding (703/1572 nt) | yegH | putative transporter |
GGCTACCTGTACGCGGCCATCGGCTTCTCGATCCTGATCGAGCTGTTCAACCAGCTGGCCCGTGCCCGCCGCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3894425‑3894290 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACCGATCATCATCAGGAAGCCCAGGCACAGCATGATCACCGTGGGGTGGGCGTTGACGAAGCGGGTCAGCGGCTTGCTGGCAACGATCATGATACCGATCGAGAAGATCACCGCGATCATC > AE015451/3894356‑3894588 GGCTACCTGTACGCGGCCATCGGCTTCTCGATCCTGATCGAGCTGTTCAACCAGCTGGCCCGTGCCCGCCGCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCT > 2:750688/1‑134 CCGCCGCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGCGGCGGGCACGGGCCAGCTGGTTGCACAGCcc > 1:95107/1‑100 GCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCTTGCGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACC > 1:1188400/1‑181 GCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCTTGCGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACC < 2:1188397/181‑1 CAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGCGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGC > 1:416869/1‑149 CAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGCGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGC < 2:416866/149‑1 CGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACCGATCATCATCAGGAAGCCCAGGCACAGCATGATCACCGTGGGGTGGGCGTTGACGAAGCGGGTCAGCGGCTTGCTGGCAACGATCATGATACCGATCGAGAAGATCACCGCGATCATC < 1:25969/234‑1 GGCTACCTGTACGCGGCCATCGGCTTCTCGATCCTGATCGAGCTGTTCAACCAGCTGGCCCGTGCCCGCCGCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3894425‑3894290 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACCGATCATCATCAGGAAGCCCAGGCACAGCATGATCACCGTGGGGTGGGCGTTGACGAAGCGGGTCAGCGGCTTGCTGGCAACGATCATGATACCGATCGAGAAGATCACCGCGATCATC > AE015451/3894356‑3894588 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |