New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 3894290 =62 (0.900)5 (0.070) 5/332 NT 7.8% coding (769/1572 nt) yegH putative transporter
?AE015451 3894356 = 58 (0.860)coding (703/1572 nt) yegH putative transporter

GGCTACCTGTACGCGGCCATCGGCTTCTCGATCCTGATCGAGCTGTTCAACCAGCTGGCCCGTGCCCGCCGCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3894425‑3894290
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACCGATCATCATCAGGAAGCCCAGGCACAGCATGATCACCGTGGGGTGGGCGTTGACGAAGCGGGTCAGCGGCTTGCTGGCAACGATCATGATACCGATCGAGAAGATCACCGCGATCATC  >  AE015451/3894356‑3894588
                                                                                                                                                                                                                                                                                                                                                                                 
GGCTACCTGTACGCGGCCATCGGCTTCTCGATCCTGATCGAGCTGTTCAACCAGCTGGCCCGTGCCCGCCGCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCT                                                                                                                                                                                                                                             >  2:750688/1‑134
                                                                 CCGCCGCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGCGGCGGGCACGGGCCAGCTGGTTGCACAGCcc                                                                                                                                                                                                            >  1:95107/1‑100
                                                                      GCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCTTGCGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACC                                                                                                                        >  1:1188400/1‑181
                                                                      GCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCTTGCGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACC                                                                                                                        <  2:1188397/181‑1
                                                                                       CAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGCGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGC                                                                                                                                       >  1:416869/1‑149
                                                                                       CAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGCGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGC                                                                                                                                       <  2:416866/149‑1
                                                                                                                                       CGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACCGATCATCATCAGGAAGCCCAGGCACAGCATGATCACCGTGGGGTGGGCGTTGACGAAGCGGGTCAGCGGCTTGCTGGCAACGATCATGATACCGATCGAGAAGATCACCGCGATCATC  <  1:25969/234‑1
                                                                                                                                                                                                                                                                                                                                                                                 
GGCTACCTGTACGCGGCCATCGGCTTCTCGATCCTGATCGAGCTGTTCAACCAGCTGGCCCGTGCCCGCCGCAAGCGCAGCCTGCAACAGCACAGGCCGTTGCGCGAACGTACTGCCCATGCCGTGCTGCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3894425‑3894290
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcGGCGGGCACGGGCCAGCTGGTTGAACAGCTCGATCAGGATCGAGAAGCCGATGGCCGCGTACAGGTAGCCTTTGGGGATATGGAAGCCCAGGCCTTCGGCGGTGAGGCTGAAACCGATCATCATCAGGAAGCCCAGGCACAGCATGATCACCGTGGGGTGGGCGTTGACGAAGCGGGTCAGCGGCTTGCTGGCAACGATCATGATACCGATCGAGAAGATCACCGCGATCATC  >  AE015451/3894356‑3894588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.