New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4192459 =	73 (1.060)	6 (0.100)	5/298	NT	8.1%	intergenic (+65/‑584)	PP_5613/PP_5614	protein of unknown function/protein of unknown function
	?	AE015451	4192479 =	71 (1.170)					intergenic (+85/‑564)	PP_5613/PP_5614	protein of unknown function/protein of unknown function

GTCAGCGCTATCCAGCTTTTCAAGCTGTAGTCCAACGCCTTGGCCGTAGCCGATCCTTCGGGCACAAGCTCGCGCTGAGCTCGCATGGCCCACGCCCGCCGCAAGTTCTTCGACCTAAATGTGGCGAACAAAAGCCAACTGGCAGAGCAGGCACTAAGCTGCTAGGGAGTTTTCAGCAACTTGGTACCTACCCAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATGGATGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4192699‑4192459 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcatccatggatgcggcAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGACTACAGCTTGAAAAGCTGGATAGCGCTGACG  >  AE015451/4192479‑4192700                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTCAGCGCTATCCAGCTTTTCAAGCTGTAGTCCAACGCCTTGGCCGTAGCCGATCCTTCGGGCACAAGCTCGCGCTGAGCTCGCATGGCCCACGCCCGCCGCAAGTTCTTCGACCTAAATGTGGCGAACAAAAGCCAACTGGCAGAGCAGGCACTAAGCTGCTAGGGAGTTTTCAGCAACTTGGTACCTACCCAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATG                                                                                                                                                                                                                                        <  2:1250850/233‑1     GCGCTATCCAGCTTTTCAAGCTGTAGTCCAACGCCTTGGCCGTAGCCGATCCTTCGGGCACAAGCTCGCGCTGAGCTCGCATGGCCCACGCCCGCCGCAAGTTCTTCGACCTAAATGTGGCGAACAAAAGCCAACTGGCAGAGCAGGCACTAAGCTGCTAGGGAGTTTTCAGCAACTTGGTACCTACCCAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATGGATGC                                                                                                                                                                                                                                   <  1:1039007/234‑1       GCTATCCAGCTTTTCAAGCTGTAGTCCAACGCCTTGGCCGTAGCCGATCCTTCGGGCACAAGCTCGCGCTGAGCTCGCATGGCCCACGCCCGCCGCAAGTTCTTCGACCTAAATGTGGCGAACAAAAGCCAACTGGCAGAGCAGGCACTAAGCTGCTAGGGAGTTTTCAGCAACTTGGTACCTACCCAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATGGATGC                                                                                                                                                                                                                                   <  2:423844/232‑1                        GCTGTAGTCCAACGCCTTGGCCGTAGCCGATCCTTCGGGCACAAGCTCGCGCTGAGCTCGCATGGCCCACGCCCGCCGCAAGTTCTTCGACCTAAATGTGGCGAACAAAAGCCAACTGGCAGAGCAGGCACTAAGCTGCTAGGGAGTTTTCAGCAACTTGGTACCTACCCAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATG                                                                                                                                                                                                                                        <  1:827613/210‑1                                                                                                         GTTCTTCGACCTAAATGTGGCGAACAAAAGCCAACTGGCAGAGCAGGCACTAAGCTGCTAGGGAGTTTTCAGCAACTTGGTACCTACCCAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCT                                                                                                                                                                      <  2:1212017/195‑1                                                                                                                              GAACAAAAGCCAACTGGCAGAGAAGGCACTAAGCTGCTAGGGAGTTTTCAGCAACTTGGTACCTACCCAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCT                                                                                                                                                                                 <  1:203818/163‑1                                                                                                                                                  AGCAGGCACTAAGCTGCTAGGGAGTTTTCAGCAACTTGGTACCTACCCAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTT                                                                                                                                     <  2:1193110/187‑1                                                                                                                                                                                                 CAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATG                                                                                                                                                                                                                                        >  2:150603/1‑41                                                                                                                                                                                                            TGACATCGGGCAATTGCTGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGG                                                                                           >  2:1284769/1‑171                                                                                                                                                                                                            TGACATCGGGCAATTGCTGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTCCCAGTTGGCTTTTGTTCGCCACATTTAGGTCG                                                                                                                 >  2:611824/1‑149                                                                                                                                                                                                                 TCGGGCAATTGCTGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGAC                                >  1:735008/1‑225                                                                                                                                                                                                                                 GCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTG                                                                                                        >  1:822249/1‑137                                                                                                                                                                                                                                 GCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTG                                                                                                        <  2:822246/137‑1                                                                                                                                                                                                                                  CATCCACGGTTGCGGTAGCCATCGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTG                                                                                                                                                 <  2:724371/95‑1                                                                                                                                                                                                                                    TCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGACTACAGCTT                        <  2:792807/214‑1                                                                                                                                                                                                                                      CATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGACTACAGC                          <  2:827610/210‑1                                                                                                                                                                                                                                       ATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGACTACAGCTTGAAAAGCTGGATAGCGCTGACG  >  2:1131932/1‑233                                                                                                                                                                                                                                           ATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTG                                                                                             >  1:202788/1‑138                                                                                                                                                                                                                                               GGCAGCAATTGCCCGCTGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGG                                                    <  2:180495/175‑1                                                                                                                                                                                                                                               GGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCG                                                     <  2:574622/174‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTCAGCGCTATCCAGCTTTTCAAGCTGTAGTCCAACGCCTTGGCCGTAGCCGATCCTTCGGGCACAAGCTCGCGCTGAGCTCGCATGGCCCACGCCCGCCGCAAGTTCTTCGACCTAAATGTGGCGAACAAAAGCCAACTGGCAGAGCAGGCACTAAGCTGCTAGGGAGTTTTCAGCAACTTGGTACCTACCCAAAAGATCAGTGACATCGGGCAATTGCTGCCGCATCCATGGATGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4192699‑4192459 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcatccatggatgcggcAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGACTACAGCTTGAAAAGCTGGATAGCGCTGACG  >  AE015451/4192479‑4192700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.