New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5170114	65 (0.950)	4 (0.060)	4/320	NT	5.0%	coding (343/1308 nt)	PP_4548	putative Oxidoreductase
	?	AE015451	= 5170444	90 (1.390)					coding (673/1308 nt)	PP_4548	putative Oxidoreductase

CAGGTGGATGTGGCGATCATCGGCGGTGGCTTTACGGGCGTGGCCACGGCGGTTGAACTGGCCGAGCGCGGCCTGAAGGTCGCCATCGTCGAAACCAACCGTATCGGCTGGGGCGCCAGCGGGCGCAACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGACGAGGCCATGCGCTCGCAGATGCGCAACCATCTGGGCGCCGAAGTTGACGACTTCATCTGGCACTTGCGCTGGCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5169874‑5170114 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgggcCATGGACGATGTCCAGCACTTCGGAATTTTCGAATATCAGTGCACCCAGGCCATGTGCGGCACGGGCTTCGCCCAGGCACAGGTTGAGTGGGTGCAGGTGCAGGTTGCGCAGGTTCTTCAACGCACCCAGATAAAGCGGGCTTTGCAGATGCTCGGCCACTGCAGCGCGATCGAGCAATTGCACCTGATCGCCCATGCCACGGCGCCGC  <  AE015451/5170444‑5170236                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGGTGGATGTGGCGATCATCGGCGGTGGCTTTACGGGCGTGGCCACGGCGGTTGAACTGGCCGAGCGCGGCCTGAAGGTCGCCATCGTCGAAACCAACCGTATCGGCTGGGGCGCCAGCGGGCGCAACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGACGAGGCCATGCGCTCGCAGATGCGCAACCATCTGGGCGCCGAAGTTGACGACTTCATCTGGCACTTGCGCTGGC                                                                                                                                                                                                                         <  1:1059075/235‑1                       GCGGGGGCTTTACGGGCGTGGCCACGGCGGTTGAACTGGCCGAGCGCGGCCTGAAGGTCGCCATCGTCGAAACCAACCGTATCGGCTGGGGCGTCAGCGGGCGCGACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGACGAGGCCATGCGCTCGCAGATGCGCAACCATCTGGGCGCCGAAGTTGACGACTTCATCTGGCACTTGCGCTGtc                                                                                                                                                                                                                         <  1:644086/213‑3                                    GGGCGTGGCCACGGCGGTTGAACTGGCCGAGCGCGGCCTGAAGGTCGCCATCGTCGAAACCAACCGTATCGGCTGGGGCGCCAGCGGGCGCAACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGACGAGGCCATGCGCTCGCAGATGCGCAACCATCTGGGCGCCGAAGTTGACGACTTCATCTGGCACTTGCGCTG                                                                                                                                                                                                                           <  1:134969/198‑1                                     GGCGTGGCCACGGCGGTTGAACTGGCCGAGCGCGGCCTGAAGGTCGCCATCGTCGAAACCAACCGTATCGGCTGGGGCGCCAGCGGGCGCAACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGACGAGGCCATGCGCTCGCAGATGCGCAACCATCTGGGCGCCGAAGTTGACGACTTCATCTGGCACTTGCGCTGGCGCGGGCCATGGACGATGTCCAGCACTTCGGAATTT                                                                                                                                                                                      <  2:1240476/234‑1                                         TGGCCACGGCGGTTGAACTGGCCGAGCGCGGCCTGAAGGTCGCCATCGTCGAAACCAACCGTATCGGCTGGGGCGCCAGCGGGCGCAACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGACGAGGCCATGCGCTCGCAGATGCGCAACCATCTGGGCGCCGAAGTTGACGACTTCATCTGGCACTTGCGCTG                                                                                                                                                                                                                           <  1:117788/193‑1                                                                          TGAAGGTCGCCATCGTCGAAACCAACCGTATCGGCTGGGGCGCCAGCGGGCGCAACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGACGAGGCCATGCGCTCGCAGATGCGCAACCATCTGGGCGCCGAAGGTGACGGCTTCATCTGGCACTTGCGCTGGC                                                                                                                                                                                                                         >  1:212137/1‑162                                                                                             AACCAACCGTATCGGCTGGGGCGCCAGCGGGCGCAACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGACGAGGCCATGCGCTCGCAGATGCGCAACCATCTGGGCGCCGAAGTTGACGACTTCATCTGGCACTTGCGCTGGCGCGGGCCATGGACGATGTCCAGCACTTCGGAATTTTCGAATATCAGTGCACCCAGGCCATGTGCGGCACGGGCTTCGCCCAGGCACAGGTTGA                                                                                                                            <  1:152195/236‑1                                                                                                                                                                                                            AGTTGACGACTTCATCTGGCACTTGCGCTGGCGCGGGCCATGGACGATGTCCAGCACTTCGGAATTTTC                                                                                                                                                                                    >  1:866245/1‑69                                                                                                                                                                                                            AGTTGACGACTTCATCTGGCACTTGCGCTGGCGCGGGCCATGGACGATGTCCAGCACTTCGGAATTTTC                                                                                                                                                                                    <  2:866242/69‑1                                                                                                                                                                                                                                              GGGCCATGGACGATGTCCAGCACTTCGGAATTTTCGAATATCAGTGCACCCAGGCCATGTGCGGCACGGGCTTCGCCCAGGCACAGGTTGAGTGGGTGCAGGTGCAGGTTGCGCAGGTTCTTCAACGCACCCAGATAAAGCGGGCTTTGCAGATGCTCGGCCACTGCAGCGCGATCGAGCAATTGCACCTGATCGCCCATGCCACGGCGCCGC  >  2:577755/1‑213                                                                                                                                                                                                                                              GGGCCATGGACGATGTCCAGCACTTCGGAAGTTTCGAATATCAGTGCACCCAGGCCATGTGCGGCACGGG                                                                                                                                                 <  2:767/70‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGGTGGATGTGGCGATCATCGGCGGTGGCTTTACGGGCGTGGCCACGGCGGTTGAACTGGCCGAGCGCGGCCTGAAGGTCGCCATCGTCGAAACCAACCGTATCGGCTGGGGCGCCAGCGGGCGCAACGGCGGCCAGGTCACCGGCAGCCTGTCGGGCGACGAGGCCATGCGCTCGCAGATGCGCAACCATCTGGGCGCCGAAGTTGACGACTTCATCTGGCACTTGCGCTGGCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5169874‑5170114 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgggcCATGGACGATGTCCAGCACTTCGGAATTTTCGAATATCAGTGCACCCAGGCCATGTGCGGCACGGGCTTCGCCCAGGCACAGGTTGAGTGGGTGCAGGTGCAGGTTGCGCAGGTTCTTCAACGCACCCAGATAAAGCGGGCTTTGCAGATGCTCGGCCACTGCAGCGCGATCGAGCAATTGCACCTGATCGCCCATGCCACGGCGCCGC  <  AE015451/5170444‑5170236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.