| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5708595 = | 78 (1.140) | 4 (0.060) | 3/320 | NT | 5.3% | coding (2613/4761 nt) | PP_5009 | conserved protein of unknown function |
| ? | AE015451 | 5708630 = | 70 (1.080) | coding (2648/4761 nt) | PP_5009 | conserved protein of unknown function | |||||
TGCCTGTCCTTTGGCATGCCGCCAAAGAGGCTCACGTTCAAAGTCCATTGTTCATGCCAGCGCGTAAGCCATGGCCCTTTTTGCCGTTCACGACCCACGATGTGGTAACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5708837‑5708595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgatgACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAGGACAGGCACACCATCAACGCTGAAAACCG > AE015451/5708630‑5708858 TGCCTGTCCTTTGGCATGCCGCCAAAGAGGCTCACGTTCAAAGTCCATTGTTCATGCCAGCGCGTAAGCCATGGCCCTTTTTGCCGTTCACGACCCACGATGTGGTAACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGT < 1:1191623/235‑1TGCCTGTCCTTTGGCATGCCGCCAAAGAGGCTCACGTTCAAAGTCCATTGTTCATGCCAGCGCGTAAGCCATGGCCCTTTTTGCCGTTCACGACCCACGATGTGGTAACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGT < 1:396264/235‑1 TTTGGCATGCCGCCAAAGAGGCTCACGTTCAAAGTCCATTGTTCATGCCAGCGCGTAAGCCATGGCCCTTTTTGCCGTTCACGACCCACGATGTGGTAACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGCGAT > 1:866426/1‑233 TTTGGCATGCCGCCAAAGAGGCTCACGTTCAAAGTCCATTGTTCATGCCAGCGCGTAAGCCATGGCCCTTTTTGCCGTTCACGACCCACGATGTGGTAACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGC > 1:506403/1‑230 GCATGCCGCCAAAGAGGCTCACGTTCAAAGTCCATTGTTCATGCCAGCGCGTAAGCCATGGCCCTTTTTGCCGTTCACGACCCACGATGTGGTAACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGT < 2:615851/222‑1 GTAAGCCATGGCCCTTTTTGCCGTTCACGACCCACGATGTGGTAACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGCGAT > 2:1175863/1‑179 ATGGCCCTTTTTGCCGTTCACGACCCACGATGTGGTAACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGCGAT < 1:528420/172‑1 TGTGGTACCCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGT < 2:39254/135‑1 AACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGT > 1:598906/1‑129 GGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGG > 2:480508/1‑123 GGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGG < 1:480511/123‑1 CCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCG > 2:1204062/1‑101 CCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGACGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGT > 1:1197642/1‑99 CCCATTCGCTGCTGCTCGGCTCGGGCCCGATGAGCTGCATGCCGTTCCAGGTCTCGCTGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGT < 2:1197639/99‑1 CGCTGCTGCTCGGCTCGGGCCCGTTGATCTGCATGCCGTCCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGCGATGACGCCTATGAGGTCATCGAGTCCTGGAACGGCATGCAGATCATCG < 1:397089/146‑1 GGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGTGCTTGACGTAGTACCGGTCGGCGATGACGCCTATGAGGTCATCGAGATCTGGAACGGC < 2:218056/116‑1 CCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGC > 2:1263996/1‑78 CCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGC < 1:1263999/78‑1 agGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGGGCTTGACGTAGTACCGGTCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCG < 2:1165698/112‑1 GATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGCG > 2:982148/1‑49 GATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGCG < 1:982151/49‑1 ATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGCGATGACGCCTATGAGGTCATCGAGCCCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCG < 2:425324/128‑1 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAGTGGCGACCCGGACGGTT > 1:659712/1‑111 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGGGCTGGCATGAA > 2:1029275/1‑167 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAGGACAGGCACACCATCAACGCTGAAAAC > 1:758227/1‑236 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAGGACAGGCACACCATCAACGCTGAAAAC > 1:474236/1‑236 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAGGACAGGCACACCATCAACGCTGAAAAC > 1:427897/1‑236 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAGGACAGGCACACCATCAACGCTGAAAAC > 1:261011/1‑236 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAGGACAGG > 1:464141/1‑215 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAAGGCAGGCACACCATCAACGCTGAAAAC > 1:556080/1‑236 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCGCTTTGGCGGCATGCCAAAGGACAGGCACACCATCAACGCTGAAAA > 1:84236/1‑235 TCGGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTT < 2:659709/111‑1 ctCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAGGACAGGCACACCATCAACGCTGAAAACCG > 1:963065/3‑236 GGCGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAGGACAGGCACACCATCAACGCTGAAAACCG > 1:1209374/1‑236 CGATGACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGG < 2:715268/145‑1 TGCCTGTCCTTTGGCATGCCGCCAAAGAGGCTCACGTTCAAAGTCCATTGTTCATGCCAGCGCGTAAGCCATGGCCCTTTTTGCCGTTCACGACCCACGATGTGGTAACCGTCCGGGTCGCCATTCCATTGCGACACCCATTCGCTGCTGCTCGGCTCGGGCCCGATGATCTGCATGCCGTTCCAGGTCTCGATGACCTCATAGGCGTCATCGCCGAGCTTGACGTAGTACCGGTCGGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5708837‑5708595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgatgACGCCTATGAGGTCATCGAGACCTGGAACGGCATGCAGATCATCGGGCCCGAGCCGAGCAGCAGCGAATGGGTGTCGCAATGGAATGGCGACCCGGACGGTTACCACATCGTGGGTCGTGAACGGCAAAAAGGGCCATGGCTTACGCGCTGGCATGAACAATGGACTTTGAACGTGAGCCTCTTTGGCGGCATGCCAAAGGACAGGCACACCATCAACGCTGAAAACCG > AE015451/5708630‑5708858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |