New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 5988771 | 39 (0.570) | 9 (0.140) | 9/322 | NT | 21.4% | intergenic (+65/‑481) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
? | AE015451 | 5988963 = | 29 (0.440) | intergenic (+257/‑289) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
CTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCGTGTCGACGCCCGTCTGATTGTCCGGGGAA > AE015451/5988770‑5989183 | ttacccagcatgacgaagaggtgctggaggcccaggggcaagtgcgtgatgaccgggccaaggtgatgcagacggccaaggaggcgcgggtggagctggagcggttgtttgattcggatgcggactgaggccttttggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCC‑AAAACTATCGCCAGGCACCTgg > 2:782637‑M2/194‑232 (MQ=255) tttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑Ca > 1:658841/1‑236 (MQ=255) ttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAAGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTc > 1:637640/1‑168 (MQ=255) gaggcccaggggcaagtgcgtgatgaccgggccaaggtgatgcagacggccacggaggcgcgggtggagctggagcggttgtttgattcggatgcggactgaggccttttggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑Ca < 1:126102‑M2/68‑1 (MQ=255) ccAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGc < 1:1083899/191‑1 (MQ=255) ccAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGc > 2:1083896/1‑191 (MQ=255) gcgtgatgaccgggccaaggtgatgcagacggccaaggaggcgcgggtggagctggagcggttgtttgattcggatgcggactgaggccttttggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGAcg > 2:750000‑M2/151‑234 (MQ=255) aCGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACaaa > 1:895104/1‑236 (MQ=255) gcgcgcgACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGCGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCCCGCTCTCacagg > 1:15525/4‑143 (MQ=18) gcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCg > 2:802265/1‑164 (MQ=255) gcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGAGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGAAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACaaaaa > 2:623531/1‑234 (MQ=255) aCGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCaa > 2:445614/1‑153 (MQ=255) gAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCCGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCAt > 1:446184/1‑210 (MQ=255) cagacggccaaggaggcgcgggtggagctggagcggttgtttgattcggatgcggactgaggccttttggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATc > 1:1079137‑M2/126‑235 (MQ=255) cgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGccc > 1:622157/1‑136 (MQ=255) cgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATc < 2:1113954/167‑1 (MQ=255) cgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATc > 1:1113957/1‑167 (MQ=255) aaggaggcgcgggtggagctggagcggttgtttgattcggatgcggactgaggccttttggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATtct < 1:750003‑M2/120‑1 (MQ=255) ggaggcgcgggtggagctggagcggttgtttgattcggatgcggactgaggccttttggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCC‑AAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCa < 1:782640‑M2/121‑1 (MQ=255) gaccgcattgcacggtttacccagcatgacgaagaggtgctggaggcccaggggcaagtgcgtgatgaccgggccaaggtgatgcagacggccaaggaggcgcgggCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCa > 2:334161‑M2/107‑148 (MQ=255) cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCgtt > 1:344213/1‑113 (MQ=21) ccgcattgcacggtttacccagcatgacgaagaggtgctggaggcccaggggcaagtgcgtgatgaccgggccaaggtgatgcagacggccaaggaggcgcgggCGGGGCTCGATCCCATgg > 2:131256‑M2/105‑122 (MQ=255) gtcgtACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACACCTCGCCGCCATGAc > 2:513670/1‑186 (MQ=255) gtcgtACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACt > 1:712590/1‑236 (MQ=255) cgtACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCAGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACt > 2:768560/1‑234 (MQ=255) aaacaaGGCGGTCGCGCGCGCCTGGCACAGGAGGGGTTGGCCAGAAACAAACGTAGGAGCGGGCTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATATCATCGGCGCCCAAAAAcgagcc > 2:97887/1‑117 (MQ=18) aaacaaGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCa > 1:315327/1‑125 (MQ=255) aaacaaGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCa < 2:315326/125‑1 (MQ=255) aaacaaGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACg > 2:513961/1‑158 (MQ=255) aGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAAc < 1:623534/235‑1 (MQ=255) gTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCAttt < 1:768563/235‑1 (MQ=255) gTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTc > 1:666788/1‑236 (MQ=255) tggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAAt < 1:781652‑M2/178‑1 (MQ=255) ggcgcgtgccttgagggttgtagtccctgggagattgggcgccgcgcgggcggcgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCAtt < 1:124193‑M2/150‑1 (MQ=255) tgcgtgatgaccgggccaaggtgatgcagacggccaaggaggcgcgggCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTcac < 2:41122‑M2/100‑1 (MQ=255) gcgtgatgaccgggccaaggtgatgcagacggccaaggaggcgcgggCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGCT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATtc > 1:210571‑M2/48‑173 (MQ=255) tgatgaccgggccaaggtgatgcagccggccaaggaggcgcgggCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCt < 1:334162‑M2/191‑1 (MQ=255) gAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCt > 1:768155/1‑235 (MQ=255) caaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGAAGAT‑‑CACCTCGCCGCCATGACCCGAAc > 1:239411/1‑136 (MQ=255) tAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCgtgt > 1:615786/1‑236 (MQ=255) tACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCGTGTCGACGCCCGTCt > 1:457373/1‑236 (MQ=255) gtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCcgc > 1:917131‑M2/30‑171 (MQ=255) cgccgcGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATca > 2:326219/1‑122 (MQ=255) cgccgcGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGa < 1:317847/194‑1 (MQ=255) cgcgcgGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCGTGTCGACGCCCGTCTGATTGTCCGGGGaa < 1:232714/236‑1 (MQ=255) cgcgggCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGa < 2:666785‑M2/183‑1 (MQ=255) ggCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAgg > 1:577450‑M2/3‑184 (MQ=255) | CTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAT‑‑CACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCGTGTCGACGCCCGTCTGATTGTCCGGGGAA > AE015451/5988770‑5989183 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |