Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	486230	486440–486414	185–211	24 [22]	[22] 23	[apaG]	[apaG]

ACCGTCCTCGGCGAACATCTGGTAGCTGCCCTGCATGGTGCCAACGCGGGTGCTGATGACGGCACCACTGCTGTAAGTGTGGCTCTGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAGGCC  >  AE015451/485994‑486357                                                                                                                                                                                                                                            |                                                                                                                                 aCCGTCCTCGGCGAACATCTGGTAGCTGCCCTGCATGGTGCCAACGCGGGTGCTGATGACGGCACCACTGCTGTAAGTGTGGCTCTGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAaag                                                                                                                                  >  1:179088/1‑236 (MQ=255)                                               cgGGTGCTGATGACGGCACCACTGCTGTAAGTGTGGCTCTGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAaagcgaa                                                                                                                              >  1:416864/1‑194 (MQ=255)                                                     cTGATGACGGCACCACTGCTGTAAGTGTGGCTCTGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCac                                                                                 >  2:1027517/1‑233 (MQ=255)                                                                                tgGCTCTGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTc                                                   <  1:421097/236‑1 (MQ=255)                                                                                tgGCTCTGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTc                                                   <  1:1009833/236‑1 (MQ=255)                                                                                    tctGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGAc                                               >  1:1141547/1‑236 (MQ=255)                                                                                     ctGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAaag                                                                                                                                  >  2:877919/1‑152 (MQ=255)                                                                                     ctGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAaag                                                                                                                                  <  1:877922/152‑1 (MQ=255)                                                                                         ccAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACt                                                                                                                        >  2:607993/1‑158 (MQ=255)                                                                                               tCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAgg                                                                                            <  1:801645/180‑1 (MQ=255)                                                                                               tCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAgg                                                                                            <  2:1148044/180‑1 (MQ=255)                                                                                                               ggCCGACCACGCCGGCGCCGCGTACTTCCGCTACCTCGCCGTCACCGTGGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAaag                                                                                                                                  <  2:238441/126‑1 (MQ=255)                                                                                                                   gACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCaata                <  1:1027520/236‑1 (MQ=255)                                                                                                                     ccACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCaata                <  2:1141544/234‑1 (MQ=255)                                                                                                                          ccGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAg          <  1:607996/235‑1 (MQ=255)                                                                                                                                           ctctACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCg                                                                                                           <  2:71773/121‑1 (MQ=255)                                                                                                                                                 cTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCCCTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAGGcc  <  1:242023/220‑1 (MQ=255)                                                                                                                                                     ccGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCtt                                  <  1:1252918/184‑1 (MQ=255)                                                                                                                                                       gTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCg                                                                                                                 <  1:503612/103‑1 (MQ=255)                                                                                                                                                       gTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCg                                                                                                                 >  2:503609/1‑103 (MQ=255)                                                                                                                                                          aCCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAg          <  1:279504/203‑1 (MQ=255)                                                                                                                                                           ccGTTGGTGATCAGCCAGGGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCggg                                                       <  1:355065/157‑1 (MQ=255)                                                                                                                                                            cGTTGGTGATCAGCCAGTGGCGCGACAGCAAATTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAg                                                                                             <  2:66105/118‑1 (MQ=255)                                                                                                                                                                                                     agagagcCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAg     <  2:1224711/162‑1 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                 ACCGTCCTCGGCGAACATCTGGTAGCTGCCCTGCATGGTGCCAACGCGGGTGCTGATGACGGCACCACTGCTGTAAGTGTGGCTCTGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAGGCC  >  AE015451/485994‑486357

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑