Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	2038142	2038416	275	23 [22]	[22] 23	[rffE]	[rffE]

CCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTTCGTCGTGATTGTTGACTGTTGTTGGG  >  AE015451/2037908‑2038251                                                                                                                                                                                                                                          |                                                                                                               ccACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCg                                                                                                              <  1:288484/236‑1 (MQ=255)    cGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGtt                                                                                                                <  2:814862/231‑1 (MQ=255)         aTCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGtt                                                                                                       <  1:740812/235‑1 (MQ=255)                        cAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAag                                                                                          <  2:676569/233‑1 (MQ=255)                             cggcAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTgg                                                                                    <  2:876768/234‑1 (MQ=255)                                                     gccGAGGGAGCTACAAAGCGCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCGATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGa                                                             <  1:795845/232‑1 (MQ=255)                                                       cGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGc                                                        <  2:743042/236‑1 (MQ=255)                                                                   aaaGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCAtt                                            <  1:775339/236‑1 (MQ=255)                                                                                     aGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTtcg                          <  1:491104/236‑1 (MQ=255)                                                                                      gTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGATCACCATCATGGCGACCCTGTGACGTTATCCCTCAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGGCCGAGTTGAATAGGTGGGGCGGGGTTTTAGGAAAGTCTGACGTGCGGAAt                                                   <  2:1181353/210‑1 (MQ=255)                                                                                         tGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTgggg                                                                                  <  1:1041474/176‑1 (MQ=255)                                                                                            ccGCGTCCGCCTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTGCTCACACCCGGTCACCACCATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGGCAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGGCCGAGTTGAAGAGGTGGGGCGGGGTTTc                                                                         <  2:374460/182‑1 (MQ=255)                                                                                                             gACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTTCGTCGTGATTGTTGACTGTTGTTggg  <  1:25311/236‑1 (MQ=255)                                                                                                               cAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTtcg                          <  2:372092/210‑1 (MQ=255)                                                                                                                         aGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCg                                                                                                              <  2:373141/116‑1 (MQ=255)                                                                                                                               cTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTgg                                                                                    <  2:1154782/136‑1 (MQ=255)                                                                                                                                    aTCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGc                                                        <  2:628830/159‑1 (MQ=255)                                                                                                                                    aTCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGc                                                        >  1:628833/1‑159 (MQ=255)                                                                                                                                                                        cTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTc                                                                         <  1:1010728/106‑1 (MQ=255)                                                                                                                                                                        cTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTc                                                                         >  2:1010725/1‑106 (MQ=255)                                                                                                                                                                                ttATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTtcg                          <  2:981359/145‑1 (MQ=255)                                                                                                                                                                                        gAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTggg                                                                                   >  2:800302/1‑80 (MQ=255)                                                                                                                                                                                        gAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTggg                                                                                   <  1:800305/80‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                               CCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTTCGTCGTGATTGTTGACTGTTGTTGGG  >  AE015451/2037908‑2038251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑