Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	3286972	3287306	335	24 [22]	[22] 23	[PP_2889]–[xthA]	[PP_2889],[xthA]

GCGCTGGGCTGCGGCGGCGGTAGTGATGCTGGCGTTGGGTGTGGGGGGCTTGGGCGGCTGGCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGG  >  AE015451/3286752‑3287163                                                                                                                                                                                                                            |                                                                                                                                                                                                 acgcTGGGCTGCGGCGGCGGTAGTGATGCTGGCGTTGGGTGTGGGGGGCTTGGGCGGCTGGCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGGGGGCCAGTTACCGGACCTGGCgg                                                                                                                                                                                  >  1:374534/2‑236 (MQ=255)                          aTGCTGGCGTTGGGTGTGGGGGGCTTGGGCGGCTGGCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGTTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGgcg                                                                                                                                                          <  1:684526/235‑1 (MQ=255)                          aTGCTGGCGTTGGGTGTGGGGGGCTTGGGCGGCTGGCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAAcc                                                                                                                                                                  <  2:549489/227‑1 (MQ=255)                                                                     gcgATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTgg                                                                                                                <  2:612506/234‑1 (MQ=255)                                                                                      cgGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTa                                                                                                                                                                                               <  2:889001/138‑1 (MQ=255)                                                                                      cgGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTa                                                                                                                                                                                               >  1:889004/1‑138 (MQ=255)                                                                                           cGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAgc                                                                                        >  1:913152/1‑236 (MQ=255)                                                                                             aCCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTc                                                                                                           <  2:434613/215‑1 (MQ=255)                                                                                                                            ccGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTgcgc                                                                    <  1:1252160/223‑1 (MQ=255)                                                                                                                             cGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCa                                                                                                                                    <  2:687633/158‑1 (MQ=255)                                                                                                                              gTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCtt                                                     >  1:796398/1‑236 (MQ=255)                                                                                                                                   tttGCCGGGAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGGGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAggg                                                                                             <  2:1075380/191‑1 (MQ=255)                                                                                                                                       ccGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCtt                                                     <  2:586157/227‑1 (MQ=255)                                                                                                                                       ccGGCAGTGAAGCACGGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTGACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCGGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCa                                                                                  <  1:372350/198‑1 (MQ=255)                                                                                                                                        cGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGgcg                                             <  2:796395/234‑1 (MQ=255)                                                                                                                                                                   cAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAg                                                                                                                                                                                                  <  1:1208090/58‑1 (MQ=255)                                                                                                                                                                   cAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAg                                                                                                                                                                                                  >  2:1208087/1‑58 (MQ=255)                                                                                                                                                                        aTCGTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGcc                                                               <  2:1140406/184‑1 (MQ=255)                                                                                                                                                                              ggCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCt                                                                                                                                                                                       <  2:222288/58‑1 (MQ=255)                                                                                                                                                                                                tggGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAg        <  2:913149/215‑1 (MQ=255)                                                                                                                                                                                                   gctgccGTTGCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCg                                                              <  2:173079/155‑1 (MQ=255)                                                                                                                                                                                                        cATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGGCGATGGCCAGCTGGAGTCGCgg  >  1:1015990/1‑213 (MQ=255)                                                                                                                                                                                                                        gCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTAt                                                  <  2:791706/149‑1 (MQ=255)                                                                                                                                                                                                                        gCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTAt                                                  >  1:791709/1‑149 (MQ=255)                                                                                                                                                                                                                            |                                                                                                                                                                                                 GCGCTGGGCTGCGGCGGCGGTAGTGATGCTGGCGTTGGGTGTGGGGGGCTTGGGCGGCTGGCAAGTGCGCGATGCAACCCTGGCGCGGGTCGACCTGCCCATGGCTGATGCTGTTCAGGCGCACCGTCTGTTTGCCGGCAGTGAAGCACTGGATATCCAGGCCAGTGATCCTGGGCAGTTGCGCGACTGGCTGGGCCGCCATTTCAGCCGGGTGGGCCAGTTACCGGACCTGGCGGGATATGGCTTCAAACCGGTGGGCGCGCGCTTGCTCAGCAACGAGCAGGGGCCGGCTGCATTACTGGTATTCGAAGATGGCAAGGGCCAGCGCATCAGCCTGTTCCTGCGCTCGCCGGGCAACCTTTATCGGCGCATGCCGGACGGGCAGCGGGTCGATGGCCAGCTGGAGGCGCGG  >  AE015451/3286752‑3287163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑