| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 135,216 | A→G | 5.1% | Q371R (CAG→CGG) | PP_0129 → | GGDEF domain protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 135,216 | 0 | A | G | 5.1% | 273.0 / 4.1 | 79 | Q371R (CAG→CGG) | PP_0129 | GGDEF domain protein |
| Reads supporting (aligned to +/- strand): ref base A (44/31); new base G (2/2); total (46/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.98e-02 | |||||||||||
AGCCGCCTTACAGCCAGGTTGCCGCGCACATCGAGCAGACCCTGATCGGTCTGCTCGATGACCTCAGCCTGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGAAAACCGCCTGGAAGGCTTGCTGGTGACGATGGAC > AE015451/134991‑135424 | aGCCGCCTTACAGCCAGGTTGCCGCGCACATCGAGCAGACCCTGATCGGTCTGCTCGATGACCTCAGCCTGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGaa > 1:126464/1‑236 (MQ=255) ccTTACAGCCAGGTTGCCGCGCACATCGAGCAGACCCTGATCGGTCTGCTCGATGACCTCAGCCTGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGc > 2:400379/1‑234 (MQ=255) gTTGCCGCGCACATCGAGCAGACCCTGATCGGTCTGCTCGATGACCTCAGCCTGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCa < 1:734945/236‑1 (MQ=255) aGCAGACCCTGATCGGTCTGCTCGATGACCTCAGCCTGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGcagcag > 2:1136198/1‑194 (MQ=255) tGATCGGTCTGCTCGATGACCTCAGCCTGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGcc > 1:512081/1‑230 (MQ=255) aTCGGTCTGCTCGATGACCTCAGCCTGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCg < 1:662097/235‑1 (MQ=255) tGCTCGATGACCTCAGCCTGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCAcgcg > 1:1018836/1‑236 (MQ=255) ccTGCCCGAGCGACACTAGGCTCAGGCGCAGGAAATGCGCGTGCGGGTTGCTTGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCATCTGCACGAGGCCAGCGCCGGCCAc < 1:675213/217‑1 (MQ=255) tGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCAc < 2:448313/215‑1 (MQ=255) gAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGATTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGcc < 1:375266/204‑1 (MQ=255) aGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCa < 2:213845/156‑1 (MQ=255) aGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCa > 1:213845/1‑156 (MQ=255) gACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATg > 2:77644/1‑156 (MQ=255) gCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGACCTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGc < 1:588777/234‑1 (MQ=255) tCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAACAGCACCGCTGCCCGCGAGCTGGAGAGCCa > 1:953071/1‑234 (MQ=255) ggCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGTCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACa < 2:387260/200‑1 (MQ=255) cgcAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGt > 1:1075202/1‑236 (MQ=255) cgcAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAAACTACCTGCAGCAGATCAATGAACGCCTGGAAGGGTTCCAGAGCCACCTGCACGAgg > 2:129140/1‑177 (MQ=255) gAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGcc > 2:670418/1‑207 (MQ=255) gAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAg > 1:97812/1‑234 (MQ=255) cgcgAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATg > 2:704664/1‑130 (MQ=255) gcgAGCGGGTTGCTCGCGGCTTGCACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACCCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCAc < 2:368328/179‑1 (MQ=255) gAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACg > 1:545037/1‑235 (MQ=255) ttGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAAt < 1:245713/119‑1 (MQ=255) ggCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGc > 2:1100371/1‑135 (MQ=255) ggCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGc < 1:1100374/135‑1 (MQ=255) ttaaCTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGAc < 1:848682/203‑1 (MQ=255) gAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGa > 2:614781/1‑179 (MQ=255) gAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTc > 2:778763/1‑201 (MQ=255) tGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTa > 1:458168/1‑236 (MQ=255) cccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCCCGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGt < 1:221134/231‑1 (MQ=255) cccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGAc > 1:995715/1‑235 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAGACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCg < 1:1284507/193‑1 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAg > 2:633984/1‑128 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCg > 2:1125328/1‑133 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCg < 1:1125331/133‑1 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGcc > 2:1269543/1‑136 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGcc < 1:1269546/136‑1 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCAcc > 2:411305/1‑153 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGcgg > 2:5878/1‑166 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAg > 2:627848/1‑173 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGccgccg > 1:424228/1‑226 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGAc > 1:753823/1‑234 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACa > 1:1028778/1‑235 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAg > 1:627540/1‑236 (MQ=255) ccGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGAGAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGAt > 1:372994/1‑228 (MQ=255) gCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGAc > 2:414093/1‑190 (MQ=255) cTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCa > 2:1151536/1‑197 (MQ=255) gACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGATCGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGt < 1:848344/171‑1 (MQ=255) ggCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCGGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGcc < 2:529914/119‑1 (MQ=255) ggCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCGGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGcc > 1:529917/1‑119 (MQ=255) ggCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTg < 2:906721/100‑1 (MQ=255) ggCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTg > 1:906724/1‑100 (MQ=255) ggCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATTGCACCGCTGCCCGCGAGc > 2:854034/1‑149 (MQ=255) aGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACg > 2:1150761/1‑101 (MQ=255) aGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGaa < 1:326197/235‑1 (MQ=255) aagCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCAAGCGGACAATAGCACCGCTGCCCGCGAg > 2:775479/3‑138 (MQ=255) aTGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGcc > 2:743263/1‑105 (MQ=255) aTGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGAAAACCGc > 2:649094/1‑234 (MQ=255) cTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGt < 2:1018833/200‑1 (MQ=255) tGGCGATCACCGACAGCGGGAAGCACGGATTCGAAACCTCCCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTg < 2:247154/86‑1 (MQ=255) tGGCGACCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACg < 2:522071/159‑1 (MQ=255) gCGACCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCAc < 2:464372/105‑1 (MQ=255) gCGACCACCGACAGCGGGCAGCACGAATTCGAAAACTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCg < 2:553768/160‑1 (MQ=255) gATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCGGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCa < 2:1061309/206‑1 (MQ=255) gATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCGGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCa > 1:1061312/1‑206 (MQ=255) gATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGAAAACCGCCTGGAAg > 2:737823/1‑233 (MQ=255) aTCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGc > 2:916590/1‑145 (MQ=255) aCCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGt < 1:496862/144‑1 (MQ=255) ccGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGAAAACCGCCTGGAAGGCTTGCt < 2:1028775/235‑1 (MQ=255) cAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGAAAACCGCCTGGAAGGCTTGCTGGTGa < 1:418280/236‑1 (MQ=255) gggCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCTCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGcc > 1:1167686/1‑151 (MQ=255) ggCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCg > 1:221518/1‑105 (MQ=255) gcagcaCGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGc < 2:514442/116‑1 (MQ=255) gcagcaCGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGAAAACCGCCTGGAAGGCTTGCTGGTGACGATg > 1:944315/1‑235 (MQ=255) cagcaCGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGAAAACCGCCTGGAAGGCTTGCTGGTGACGATg < 2:974998/234‑1 (MQ=255) agcaCGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGAAAACCGCCTGGAAGGCTTGCTGGTGACGATGGAc > 1:443147/1‑236 (MQ=255) cGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAg > 2:398948/1‑111 (MQ=255) cGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAg < 1:398951/111‑1 (MQ=255) cctacctGCAGCAGCGCAATGAACGCCTGGAAGGTTTCCAGAGCCCCCCGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTg < 2:280097/153‑1 (MQ=255) | AGCCGCCTTACAGCCAGGTTGCCGCGCACATCGAGCAGACCCTGATCGGTCTGCTCGATGACCTCAGCCTGCCCGAGCGACACAAGGCTCAGGCGCAGGAAATGCGCGAGCGGGTTGCTCGCGGCTTGAACTGGTATGAACTGATCCCGGTGCTGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCGCCGGCCACGCGGACAATAGCACCGCTGCCCGCGAGCTGGATAGCCAACTGCGTGAGCACGTCGACGGCCTGCAGAGCAGCGTGCAAGGTGCCGCCGATGTAGACAGCCTCAAGCACATTCTGGAAAACCGCCTGGAAGGCTTGCTGGTGACGATGGAC > AE015451/134991‑135424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |