| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 499,203 | A→G | 100% | intergenic (+47/‑249) | uhpA → / → PP_0411 | DNA‑binding response regulator UhpA/Polyamine ABC transporter, ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 499,203 | 0 | A | G | 100.0% | 188.7 / NA | 50 | intergenic (+47/‑249) | uhpA/PP_0411 | DNA‑binding response regulator UhpA/Polyamine ABC transporter, ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (17/33); total (17/33) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
AATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCAGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGC > AE015451/498984‑499426 | aaTTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACg < 1:910430/236‑1 (MQ=255) tCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGgcctggcctg < 1:475374/235‑1 (MQ=255) ggCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACg < 1:122024/207‑1 (MQ=255) aCGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCct > 1:1197384/1‑236 (MQ=255) cGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCgg > 1:1280430/1‑234 (MQ=255) aTCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCctct < 1:786527/227‑1 (MQ=255) cccAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGATCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCct > 1:23574/1‑221 (MQ=255) gTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGc < 1:101328/219‑1 (MQ=255) tCGAGCAAGACCATCAGCACCCGCAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACGCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGgcctggcctg < 1:239591/179‑1 (MQ=255) cGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACCGGTTTcc > 1:1154704/1‑234 (MQ=255) gAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTa > 2:1253469/1‑187 (MQ=255) gAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTcat < 1:26210/235‑3 (MQ=255) cACCCACAAGGTACGGCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGggcct < 2:354020/156‑1 (MQ=255) aCCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTa < 2:531964/171‑1 (MQ=255) ccACAAGGCACGCCTGATGCAGAAGGTGAAAGTGATCTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggc < 2:151301/156‑1 (MQ=255) cacaAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGc < 1:1134073/197‑1 (MQ=255) aaGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCct > 1:1033123/1‑180 (MQ=255) gCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCaa < 1:736539/223‑1 (MQ=255) cGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCGGGCCTGCTGATCTCTATgg > 1:366947/1‑162 (MQ=255) gATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGggcct < 2:293632/138‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGGGCGGGTGAAGTACGCCATG‑‑GAGCACAAGCGGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATcc < 1:120534/222‑1 (MQ=255) aGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAgg < 1:727385/236‑1 (MQ=255) gggAACTCGCTGGCGGAGCGGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGt < 2:585480/187‑1 (MQ=255) tCGCTGGCGGGGCTGTGGAAGTACGCCAGG‑‑GAGCACAAGCTGATCTGAGTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGgcctggcctg < 2:247823/122‑1 (MQ=255) cgtgCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGggcct < 2:186117/110‑1 (MQ=255) ggCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTcgcg < 1:1122075/149‑1 (MQ=255) gCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGAGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGt < 2:1033780/172‑1 (MQ=255) gTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTg > 2:912423/1‑203 (MQ=255) aGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTc < 1:33441/182‑1 (MQ=255) cGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCg > 2:396907/1‑141 (MQ=255) ccATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCGGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCg < 2:466209/184‑1 (MQ=255) cATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTacaaca > 1:953142/1‑211 (MQ=255) agg‑‑gAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCctct < 2:1267653/120‑1 (MQ=255) aTG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGTATTCCAATCCCg < 1:1210630/182‑1 (MQ=255) gAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCTGATG‑CCTATGTGTGAGCGGTCATGCCCGCGAACGGTCCTGGCCTGCTGATCTCTCTGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGTTCCCACTGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCg < 2:1203661/179‑1 (MQ=255) gCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCAGGCCCGCTCCCACAGGtcg > 2:33441/1‑143 (MQ=255) acaAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAgg < 1:1208595/189‑1 (MQ=255) acaAGCTGATCTGATTGCGACATACGGGTGCCAGAAACTTGCCGAAGCCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAgg > 2:1208592/1‑189 (MQ=255) agatgagctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAgg < 1:1211782/182‑1 (MQ=255) ctgatctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCTCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTAcccc > 1:178430/1‑236 (MQ=255) tGCGCCATCCGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGCTCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATg < 2:165708/111‑1 (MQ=255) cGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCAtt < 2:1023838/149‑1 (MQ=255) aCATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCa > 2:480044/1‑207 (MQ=255) tACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAgg < 1:871501/166‑1 (MQ=255) ggTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGt > 1:1112751/1‑235 (MQ=255) gAAACTTGCCGAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGgatgac > 2:869736/1‑188 (MQ=255) ttGCCGAGG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGGGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCaa < 2:125484/132‑1 (MQ=255) gAAG‑CCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGGCGGCCTCTTCGCGGGCATGCCCGCTCCCCCAGGTTTCGGGGGTGGCTCGCAAGGGCa > 2:158221/1‑121 (MQ=38) ccTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCg < 1:966605/128‑1 (MQ=255) cTATGTGGGGGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGc < 1:303398/236‑1 (MQ=255) | AATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATG‑‑GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAG‑CCTATGTGGGAGCAGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGC > AE015451/498984‑499426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |