| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 1,258,757 | G→T | 6.3% | R83S (CGC→AGC) | PP_1102 ← | conserved protein of unknown function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 1,258,757 | 0 | G | T | 6.3% | 225.9 / 5.3 | 64 | R83S (CGC→AGC) | PP_1102 | conserved protein of unknown function |
| Reads supporting (aligned to +/- strand): ref base G (36/24); new base T (2/2); total (38/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01 | |||||||||||
TGTACATGGCCCGCCAGTACCGGGTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGCGCGGCGGGCGGGCCAGTAGATGGCTTTGTCGGCAAGCAGCCAGAGCGCCTGCCCCCGGTGTTCGATGGG > AE015451/1258531‑1258991 | tgtACATGGCCCGCCAGTACCGGGTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCa > 1:612728/1‑235 (MQ=255) aCATGGCCCGCCAGTACCGGGTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGa > 2:1223474/1‑234 (MQ=255) tGGCCCGCCAGTACCGGGTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTc < 1:575104/236‑1 (MQ=255) ggCCAGTACCGGCTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTTCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGc < 1:1187478/232‑1 (MQ=255) cGCCAGTACCGGGTGTGTGCCGGGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCg < 1:339026/232‑1 (MQ=255) aGTACCGGGTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCTGGCATGCAGAAAGTCGCCCAGgat > 1:619678/1‑236 (MQ=255) aGTACCGGGTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGgat > 1:1024290/1‑236 (MQ=255) cGGGTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGgatgat < 2:901949/234‑1 (MQ=255) cGGGTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGgatgat < 2:1024287/234‑1 (MQ=255) gTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAg > 2:722144/1‑216 (MQ=255) ggCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTc > 2:671208/1‑233 (MQ=255) cGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGcg > 2:1062511/1‑232 (MQ=255) cTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCCCTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCa > 1:7899/1‑212 (MQ=255) gctgcAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGc > 2:796670/1‑216 (MQ=255) gctgcAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGAGGATAGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGgatg > 2:655247/1‑203 (MQ=255) tgcAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGc < 1:1051771/235‑1 (MQ=255) gCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCg > 1:79315/1‑236 (MQ=255) tCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAg < 1:796673/236‑1 (MQ=255) aaGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGACCCTGGCGAGTGTCGCCt > 2:393467/1‑234 (MQ=255) aaGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATCTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCATCGTTGCCGGGGCGCGGGCCGCGCGGGCATGCAGa > 2:29571/1‑161 (MQ=255) gCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTc < 1:868241/236‑1 (MQ=255) tCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGgat > 1:951495/1‑170 (MQ=255) cACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCcg > 1:443617/1‑235 (MQ=255) aCGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCcgc > 1:876068/1‑235 (MQ=255) aCGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCcgc > 1:622768/1‑235 (MQ=255) aCCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTg < 1:722147/235‑1 (MQ=255) aCCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTg < 1:262773/235‑1 (MQ=255) aaTATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCAcc < 1:671211/235‑1 (MQ=255) tatCGAGCGAGGCTGGTGGAGCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGGTGATCAGTTGTTCGCAGt > 1:498445/1‑171 (MQ=255) atCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCTGGCATGCAGAAAGTCGCCCAGgatgat < 2:972672/156‑1 (MQ=255) atCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCTGGCATGCAGAAAGTCGCCCAGgatgat > 1:972675/1‑156 (MQ=255) cgggcgagGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTg < 2:414910/222‑1 (MQ=255) gcgagGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCCGGATGATCAGTGGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTccc > 2:85132/1‑203 (MQ=255) gcgagGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATCATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGACCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCCGTTGATg > 1:764491/1‑235 (MQ=255) gagGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTgg > 2:853094/1‑193 (MQ=255) gagGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGcgg > 2:737348/1‑234 (MQ=255) tggtggATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGgcg > 1:1168827/1‑235 (MQ=255) tggtggATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGGGCGggcaggca > 1:223289/1‑125 (MQ=255) gATCATGATTGCCGCGTATGAGCACCACTTTCCGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTgg > 2:1207982/1‑225 (MQ=255) gATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTgg < 1:1207985/225‑1 (MQ=255) cgcgTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGAt > 1:455902/1‑195 (MQ=255) gAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGccac > 2:740908/1‑234 (MQ=255) cgcTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCgg < 1:49379/120‑1 (MQ=255) ttCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGccc > 1:882358/1‑87 (MQ=255) ttCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGccc < 2:882355/87‑1 (MQ=255) tCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCt > 1:1090465/1‑193 (MQ=255) tCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCt < 2:1090462/193‑1 (MQ=255) tCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAgg > 1:26332/1‑231 (MQ=255) tCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGgcg > 2:1096786/1‑233 (MQ=255) tCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGcgcg > 1:589727/1‑235 (MQ=255) aTTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTgg < 1:484280/191‑1 (MQ=255) tttttGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGa > 1:29196/1‑202 (MQ=255) ttGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAgg > 2:1264383/1‑174 (MQ=255) ttGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAgg < 1:1264386/174‑1 (MQ=255) tgCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCCTGCAGAAAGTCGCCCAGGATGATCCGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATTGAGCCTGACGAGTGTCGCCTCAGTCGTTCCGCGt > 2:14136/1‑153 (MQ=255) tCGCCAATCCTCCCCCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTg < 1:201559/146‑1 (MQ=255) aTCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTcc < 2:602931/135‑1 (MQ=255) tccACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTgg < 1:937399/166‑1 (MQ=255) cACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCTCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGCGCggcggg < 1:1247019/209‑1 (MQ=255) cACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGCgcggc < 1:758643/206‑1 (MQ=255) aGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAg > 2:300988/1‑47 (MQ=255) ttGCCGGGGCGCGAGCCGTGCGGGCATGCAGAAAGTc < 2:951492/37‑1 (MQ=255) tGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGCGCGGCGGGCGGGCCAGTAGATGGCTTTGTCGGCAAGCAGCCagag > 2:728602/1‑231 (MQ=255) gggCGCGGGCCGTGCTGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGCGCGGCGGGCGGGCCAGTAGATGGCTTTGTCGGCAAGCAGCCAGAGCGCCTGc < 2:619675/233‑1 (MQ=255) gggCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGCGCGGCgggcgggc > 1:162222/1‑179 (MQ=255) gggCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGCGCGGCGGGCGGGCCAGTAGATGGCTTTGTCGGCAAGCAGCCAGAGCGCCTGCCCCCGGTGTTCGATggg > 1:1113626/1‑235 (MQ=255) gggCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGCGCGGCGGGCGGGCCAGTAGATGGCTTTGTCGGCAAGCAGCCAGAGCGCCTGCCCCCGGTGTTCGATggg > 1:1091871/1‑235 (MQ=255) | TGTACATGGCCCGCCAGTACCGGGTGTGTGCCGTGGGGCTGCGGCTCGTGCTGCAGGGCAAAGGGCTCCAGAACCCAAGGCTCGTCCACGACCTGAATATCGAGCGAGGCTGGTGGATCGCCGGCGTTGCGATCATGATTGCCGCGTATGAGCACCACTTTCAGATTTTTGTGCCGCTTTCGCCAATCCTCCACCTTGGCCAGCGTTGCCGGGGCGCGGGCCGTGCGGGCATGCAGAAAGTCGCCCAGGATGATCAGTTGTTCGCAGTCATGCTCGGCCAGCAGGCGATCGAGCCTGGCGAGTGTCGCCTCAGTCGTTCCGCGTGGCACCGGTTGATGCAGGGCGCGGTAGCTGGCGGCCTTTCCGATGTGCACGTCGGCCACCAGCAAGGCGCGGCGGGCGGGCCAGTAGATGGCTTTGTCGGCAAGCAGCCAGAGCGCCTGCCCCCGGTGTTCGATGGG > AE015451/1258531‑1258991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |